Astyanax mexicanus (Mexican tetra): 103044475
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Entry
103044475 CDS
T05042
Symbol
rab11fip5a
Name
(RefSeq) uncharacterized protein rab11fip5a isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103044475 (rab11fip5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103044475 (rab11fip5a)
Membrane trafficking [BR:
amex04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
103044475 (rab11fip5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
103044475
NCBI-ProteinID:
XP_007236483
Ensembl:
ENSAMXG00000038496
LinkDB
All DBs
Position
7:complement(27611566..27666549)
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AA seq
1567 aa
AA seq
DB search
MCSVNAADEEQRWVPTHVQVLVIRARGLRAKGKHGTSDAYTLMQLGKEKYSTCVVEKSTA
PEWSEECSFELQPGVLEEGGRDACAPGSCDLTLTVMHRALIGLDVFLGQAVIPLDKAFSE
RICMKNEWYKLHSKTEKKVKERGELQVTVQFTRHNLTASMYDLSKPRSAFGKLRERMRAK
KRSADEESSSAIVPGGYGALARMRGRLPSDGGGEEDYEDDEGGELRRSKMRSFFLRGRLR
KSSDTRSSTSLGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNLTADNSPEHTVAP
SPQVSPVKHAFDEPCDNSIPVPNSLTNDNDFHILLPSVCVNGNPVETSPLTHQPPTLILQ
QPKPQPQTQQEPTRTPPQTSSPEKKLTRPHTAKPQVDPQTQLPKVESKPKLEPKLSGLGL
LQKGSALSLSLQNLSRRGEERKGGGPIDGRRWSFDRPGDEEKAAIAAALENAGLITDEPE
VEAMTVSETEVPSKKKRGLFSHGRGGESAGKGSGTGKEETGHGQPPTEGKHRGWFSSKDS
KPSQLLALQDSSPSKTKPPSTLTLTDPSQGTAHQYTNPFTSPPLLSPANPFFSHLQQNPF
FQDLCTVTLTPALPSLFSPDCTQSTAPSFSTSNYTSPSGLHEAGHTNGHSVNNKASEMAI
KPKDIHISDECGLNPDWDNFLSNTIKPSKPPPLIKPPDPTPSGGECGLTLSNISNTTPAC
TFPDTLDSSNTILHPSANSICWRAGDTDLNSSPAQEALVSDFDSSLPQNSSIEFSELNTL
ACPYPSISVCSVNQDSFSAVSDRENFVVEPQITSLCSDAFSALSLSFVSSEVSPFGNKSL
DSLWPEVGKKTKHELVKCPSSEMLIDDTDKSVETLKSKGLSSEESLEPTIITSDSPDYQT
LESSHLQTRTDHLKFNKSTTNDKGNVGVVDLKECVVKDETHLHGLSVPAGTRYQSVLNAT
AVVEEKDAEGEPGCIMSLDKTDASPVKDGSLIDNLEVIMTSSPGVSSNIQEDISDWPPDP
CRGNLRVDIEQLTVETPFVSRQTPSVGYLHPLSANVSMETEPSALIAALSPGSQFFHSLY
TSVDSEQYVTCRSLHSSLSTHFQEPEPEHDAFQEAKPKESQGVLPVNDLLQKNMSEIESS
QKTPEVFQKTDNVRNGFQFDPLNPPVCHESMPNFNTSKKTLLKCDLIDEAVGAGMTNEAN
ERTVDMMLNHNLKQEEKKVTPLKKMTRTEEEYVKSDPQLCLVNTQTDLPESHLSHDVRHD
TAHGVQPAENLNDTLCDLLSEPSSSITQDLVTTDLLLEKIFVPGHNAASTIKTVAVEHSQ
TKNSDKNSNTQEATAALRCTESLYLDNCKAKPPLPEPSSIEQPTLPHSLLWDLLPLASST
PDIVVGTNTLSSFPFPKMPPTPANSSQSTVLAAALLPPTQLVSHAPLPQETHQVPTPNSP
HPVKPLTPPDEKRSEGRSVLEKLKSTIHPGRSHHGDQDSEKKALVEGGGSYYHLNHSELV
SLLLQRDAELQQEKEEYERRGMLLEKREVEIKKMKVIIRDLEDYIDTLLVRIMEQTPTLL
QVRSKMK
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcagtgaacgccgcggacgaggagcagagatgggtgcccacgcacgtgcaggtg
ctggtgatccgtgcgcgcggcttgcgcgccaagggcaagcacggcacgagcgacgcgtac
acgctgatgcagctgggcaaggagaagtactccacgtgcgtggtggagaagagcacggcg
cccgagtggagcgaggagtgttcgttcgagctgcagcccggcgtgctcgaggagggcggc
cgcgacgcgtgcgccccggggagctgcgacctgaccctcaccgtcatgcaccgcgcgctc
atcggcctcgacgtgttcctgggccaggccgtgatccccctggacaaggccttcagcgag
cggatatgcatgaagaacgaatggtacaagcttcactcaaagactgaaaaaaaggtgaag
gaaagaggggagctccaggtaaccgtgcagttcacacgccacaacctgacggccagcatg
tatgacctctccaagcctcgctctgcctttggaaagctgcgagagcgcatgcgtgccaaa
aaacgaagcgcagacgaagagtcttcctctgctatcgtccctgggggctatggggcgctg
gcgcggatgaggggccggttaccgagcgatggaggaggagaagaagactatgaagatgac
gagggtggggagctgaggagaagtaagatgaggagtttcttcttgcggggaaggttaagg
aagtcttcagatacacgctctagcacatcactgggctccgagagtagtgagtcgtcttcc
agaggaggcagtctcagccctacagctggtatcagtgtggtggtttctgatctgtccaac
tcccctagtaacagcagcaacctgacagcagataacagcccagagcacacagtagcacca
tcaccgcaggtctctcctgtcaagcatgcgtttgatgagccatgtgacaatagcatcccg
gtgcctaattccctaactaacgacaatgacttccacattcttctgccctctgtctgtgtg
aatgggaatccggtggaaacatctccacttactcatcaaccaccaacactgatactgcaa
cagcccaagccacagccgcagacccaacaagaaccaaccagaacgccacctcagacgagt
tcaccagagaaaaaactgactcggcctcacacagcaaaaccacaggtagaccctcagaca
cagctgccgaaggtggagtcaaagcccaagcttgagcctaagctgtcaggtctagggctt
ctgcagaagggctccgcactctccctctctctgcagaacctctctcgacgtggagaggag
cggaaaggcggagggccgatagatgggcggcgctggtcttttgatagacctggagatgag
gagaaagctgctattgctgctgcactggagaacgctgggttgattactgatgagccagag
gtggaggcgatgactgtttctgagacagaagtgccaagcaagaagaagcggggtttgttt
tcacatgggcggggcggtgaatctgctgggaaaggatcgggaacaggcaaagaagaaaca
ggccatggccagccacctacagaaggaaaacacagaggatggtttagctctaaggatagt
aaacccagccagcttcttgctcttcaggactccagccccagcaaaaccaaacctccttca
accttgaccctaacagacccctcacagggcacagcccaccagtacactaatccattcacc
tcacccccattgctctcccctgccaaccctttcttttctcatctgcagcagaatcctttt
ttccaggatctgtgtactgttactttaactcccgctttgccctctctttttagcccagac
tgcactcaatctacagcaccttccttcagtacaagcaactacacttctccttcaggctta
catgaggctggacatacaaatggacactctgtgaacaacaaagcatcagaaatggctata
aaacctaaggatattcatatatcagatgagtgtggattaaatccagactgggataacttc
ttaagcaatacaataaagccatcaaagcctcctcctctgatcaaaccacctgacccaaca
ccttcaggtggtgagtgtggtctgactttgtctaatataagtaacactacaccagcatgc
actttccctgatactttagactcttctaacacaattcttcatccttcagctaattccatt
tgctggagggctggcgatactgacctcaatagctctcctgcccaggaagctctagtgtct
gactttgactcatccttgcctcagaactcaagtatagagttctctgaactcaacacactg
gcctgtccttacccttcaatttcagtgtgctctgttaatcaggacagttttagtgcagtc
tctgatcgagagaactttgtagtggagcctcaaatcacatctctgtgcagcgatgcattc
agtgcattgtcattgtcctttgtatcttctgaagtatcaccatttggcaacaaatcctta
gattctctatggcctgaggtcggcaagaagaccaaacatgagcttgtcaaatgtccttct
tctgaaatgttaatagatgacactgataagtctgtggaaaccctcaagtctaaaggcttg
agctcagaggagagtctggagcctaccatcatcacatctgactcccctgactatcagact
ttggaatcaagtcatttacaaacaaggacagatcatctcaaattcaataagagtaccaca
aacgataaaggaaatgtgggagttgtagatttgaaagagtgtgtcgttaaggatgaaaca
cacttgcatgggttgtcagtaccagcaggaaccagataccagagtgtattgaacgcaaca
gcagtagtggaagagaaagatgctgaaggtgaaccagggtgtattatgtccttggacaaa
actgacgctagtcctgtcaaagatggctcattgattgacaacttggaggtcattatgaca
tcctctccaggagtctcaagcaacatccaggaggacatcagtgattggccacctgatcca
tgcaggggcaacctgagggtcgatatcgaacaacttacggtagagacaccatttgttagc
agacagacaccgtctgtaggttacctccatcctcttagtgccaacgtgagcatggagaca
gagccaagtgctctgattgcagcactgtctcctggcagccagttcttccacagcctgtat
actagtgtagattcagagcagtacgtcacctgcaggtcactgcacagttccctgtccact
cattttcaagaacctgagccagaacatgacgcttttcaggaagccaaaccaaaagaatct
cagggggtgttgccagtcaatgacctattacagaagaacatgtcagaaatagagagcagc
caaaaaacacctgaagtctttcaaaaaacagacaatgtcaggaatggttttcagtttgat
ccgttaaatccaccagtatgtcatgaatccatgccaaattttaatacttctaagaaaacc
ttactaaaatgtgacctcatagatgaggctgtaggggctggtatgacaaatgaagcaaat
gaacgaactgtggacatgatgctcaaccataatttaaaacaggaggaaaaaaaggttacc
cctttaaaaaagatgacgaggacagaagaagaatatgtgaagtcagaccctcaactatgt
ttggtgaatacccagaccgatctacctgaatcccatttgtcccacgatgtgcgccatgac
acagcacatggtgtccagcctgccgagaacctaaatgacactttgtgtgatttactgtct
gaaccaagctccagcatcacccaggacttagttacaacagatttgcttttagagaagatt
tttgttcccgggcacaatgcagcatctactatcaaaacagttgctgttgagcactctcaa
acaaagaattcagacaaaaacagtaatacacaagaagctacagctgctctacgttgtaca
gaaagcttgtacttggacaactgtaaagctaaaccgcctctacctgaaccctcaagcata
gaacagccgacccttccccattctttgctttgggacctcttgcccctagcctcgtctaca
ccagatatagtagtaggcactaatactctgtcctcgttccccttccctaaaatgccacca
actccagcaaattcatcccagagtactgtgctggctgctgctcttcttccccctacccag
cttgtatctcatgctcctttaccacaggaaacacatcaggtgccaactcccaacagcccg
cacccagtaaagccactcacacccccagatgagaagaggtcagaaggtcgctctgtgttg
gagaaacttaagtccacaattcatccaggacggagtcaccatggagatcaagattctgaa
aagaaggccctggtggaaggtggaggctcctactaccatctgaaccacagtgagctggtg
tccttactgttgcagcgagatgctgagctccagcaggagaaggaggagtatgagcgccgg
gggatgttgctggagaagcgggaggtggagataaagaagatgaaggttataatccgagat
ctggaagattacattgacactctgctcgtccgcatcatggagcaaacgcctacgctgctg
caggtccgctccaagatgaagtga
DBGET
integrated database retrieval system
