Astyanax mexicanus (Mexican tetra): 103044481
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Entry
103044481 CDS
T05042
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103044481 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amex01007
]
103044481 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amex03016
]
103044481 (farsb)
Enzymes [BR:
amex01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
103044481 (farsb)
Amino acid related enzymes [BR:
amex01007
]
Aminoacyl-tRNA synthetase
Class II (U)
103044481 (farsb)
Transfer RNA biogenesis [BR:
amex03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103044481 (farsb)
Prokaryotic type
103044481 (farsb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
Glyco_hydro_77
EAD7
Motif
Other DBs
NCBI-GeneID:
103044481
NCBI-ProteinID:
XP_049322886
Ensembl:
ENSAMXG00000033881
LinkDB
All DBs
Position
18:14173412..14182861
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AA seq
589 aa
AA seq
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MPTVSVKRDLLFRALGRKYTDEEFDELCFEFGLELDEITSEKDIISREQGDQKAEGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKQKMEAPRYRRVSAESGEPQRLIITEETAGVRP
HAVAAVLRNITFTQNRYESFIELQEKLHQNVCRKRTLVAIGTHDLDTISGPFTFTAKAPD
DIRFTPLNQSQEYTATQLMSLYKTDSHLRHYLHIIEDEPLYPIIYDSNGIVLSMPPIING
DHSKISVNTKNVFIECTATDLTKAKIVLDMIVTMFSEYCAEPFTVEEAEVVYPDGRMVTY
PELAYRTETLSADYINRRVGISESADSVAQLLTRMCLKSEVVGDDGQILVEIPPTRSDVI
HACDIMEDAAMAYGFNNITMTTPRTYTIANQLPLNKLTELLRMDLAAAGFTEALTFALCS
QEDIADKLGKKITETRAVHISNPKTAEFQVARTTLLPGLLKTLAANRKMPLPLKLFEISD
VVLKDETTDVGARNNRRLCAVYYNKSPGFEVIHGLLDRVMQLLEVRPGRKRGYYIQAAED
SSFFPGRCAEIYAHEKVVGRLGVLHPDVINGFELTMPCSALDIDLEHFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggtcagtgtgaagcgggatctgctgttcagagctctgggcagaaaatacact
gatgaagaatttgatgagctgtgtttcgagttcggtctggagctggatgagattacgtcg
gagaaggacatcatcagtcgtgagcagggagatcagaaggctgaaggagcctctgatgtg
attctgtataagatcgatgttccagcgaatcgctatgacctgctgtgtctggagggactg
gtcagaggccttcaggtcttcaagcagaagatggaggccccccgctacaggcgtgtgagt
gcggagagtggagagccccagaggctgatcattactgaggagacggctggtgtgagaccc
cacgctgtggctgcagtgttgcgaaacatcaccttcacacagaatcgttatgagagcttc
atcgagctgcaggagaaactccatcagaacgtctgcaggaaaaggacgctggttgctata
ggaactcatgacctggataccatctccggaccgttcaccttcacggctaaagctcccgac
gacattcgcttcacccccctgaaccagagccaggagtacaccgccacccagctcatgagc
ctctacaagacagacagtcacctgaggcattacctgcacatcattgaggatgagcctctc
taccccatcatctacgacagcaacggcatagtcctgtccatgccccccatcatcaatggg
gatcactccaaaatatctgtgaacacgaagaacgtctttatcgagtgtacggccacagat
ctcaccaaggccaaaatcgtactggacatgattgtgactatgttcagtgaatactgtgcc
gagccattcacggttgaggaggctgaagtggtttatccggatggcaggatggtcacttat
ccagagctggcctacaggactgaaaccctttcagcagattatatcaaccgcagagtagga
atcagtgaatcagctgatagcgttgctcagttgttgacgaggatgtgtctgaagtcggag
gttgttggtgatgatggtcagatcctggtggagatcccgcccactcgctctgatgttatc
cacgcctgtgacatcatggaggatgctgctatggcatatggctttaataacatcactatg
acaacaccacgcacatacactatagccaatcagctccctttaaataagctcacggagttg
ttgaggatggatctcgcagcagctggatttactgaagcgcttacctttgctctgtgttcc
caggaagatatagcagataaactgggaaagaagatcacagagaccagagctgtacacatc
tccaaccctaaaacagcagaattccaggtggcgaggaccactctgcttccagggctacta
aagactctggctgctaacaggaagatgcccctccccctcaaactgtttgagatctccgat
gtagttctgaaggacgaaaccaccgatgttggagctcggaataacaggcgtctgtgtgcg
gtttactacaataagagtccgggcttcgaggtgatccacggcctgctggaccgggtcatg
cagctgctggaggtccgaccgggccgtaaacgcggatactacattcaggccgccgaggac
tcctccttcttcccgggacgctgtgcggagatctatgctcatgagaaggttgtgggacgt
ctcggcgttcttcaccctgacgttattaacggcttcgagctcaccatgccctgctccgcc
ctcgacattgatctcgagcacttcctgtga
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