Astyanax mexicanus (Mexican tetra): 103044567
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Entry
103044567 CDS
T05042
Symbol
ranbp2
Name
(RefSeq) E3 SUMO-protein ligase RanBP2 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03013
Nucleocytoplasmic transport
amex03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103044567 (ranbp2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103044567 (ranbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103044567 (ranbp2)
03110 Chaperones and folding catalysts [BR:
amex03110
]
103044567 (ranbp2)
04121 Ubiquitin system [BR:
amex04121
]
103044567 (ranbp2)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103044567 (ranbp2)
Chaperones and folding catalysts [BR:
amex03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
103044567 (ranbp2)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
103044567 (ranbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
WH1
TPR_2
TPR_1
TPR_14
TPR_7
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_11
Motif
Other DBs
NCBI-GeneID:
103044567
NCBI-ProteinID:
XP_049340710
LinkDB
All DBs
Position
11:complement(23950706..23988968)
Genome browser
AA seq
2902 aa
AA seq
DB search
MRRSKADVERYISSVESLSPARTQKPVKGFLFAKLYFEAKEYELAKRHVSDYLTVQVRDP
KAHRFLGQLYEREGEIEKAVGCYKRSVDLNPAQRDLVLKVAELLCSKPELDSRAEFWVEK
AAKLLPGHPAVFDLREKLLSVKGQQGWNQLYDLLQSELQLRPCDAHVNSKLVQLYCSDGR
LEDAAKHCLSVEKAGLLRHSLFWYTTAVQTIQEYLSQPSVSANEKVCRRFKKELLLAHCS
LLRLTLSEKGCQESVDALKTFDHAMQSLKSTALSVADELSEVYTEMKGHLYLYAGTLLLK
MAVEKEHQWRAVIHLAAFCYLLAYQVPRPKTRPEKGEQISPKPLESLASYRQSQAGHMLL
NLNQETEHLVTEVVEVYGNRSGQDSLMEMLFGSQGSASSSFIGNDVISGITAQAPDIQEL
NKWDSGSIVHYGDLQYLTWLGLQWSLMGERPALKEWLKQLFPRLTLETFKLDTNAPESIC
LLDLEVFLCGVVFTSHTQLQETAKISASSQLHEPRCLPLQLLKLLSSERQREWWDAVYSL
IHKRAVPNMSAKLRMIVQHGLNTLRAREKHGLQPALLIHWSRHLSIAGDGVNSYYDQKEY
VGRSVHYWNVVLPLLESIEKRRSIAEPLDPLFMHFNSKDMQASEVKLFEEEAMIAFATLL
DIEGKTDQAISKLEKLNCVSSHWHLARIYQRLSEEAGNGVEETQDMCMNFLRQFKKYLSK
IYHASADDMEKLPVSMEEVIDLLNEVNNQLGESGEGMDRVDGLPMTSSPRSLADPTVAGS
HKFSMSSPAKSVLSPSKRPVFSPKTPPHWVEDQKSLLKMLCDQVEALKNEVHDLRHNTSE
GTEPPYSRVYTGNYSGETLQEPFSAQQTFHGVPLTVATTGPSVYYNQSPAYNSQYLLRPA
ASVTPTKAPVYAVNRLPQQHMYAYQQPTHTPPLQTACMYPQEQVFGPPLRFESPATTLLS
PYSEEYCSHNASQSSTNPALPEPGYFTKPPAIPAQSCKSGEGKSDMKMSFTSQIPVETSK
VPSFGSGAAQMTSAGTAFKFNSNFKSNDGDFTFSSSHLKNNSESLLGLLTSDIPPRPEGH
SALKPQTQDQPASQGGIFTFGSKPAPGFSFTDGSQGKGMFFGKPDQTFNFANTAKPTPGA
ENVEETDERCVESDGSTHVEEDEDGPHFEPIVPLPDKVDVKTGEEEEEEMFCNRAKLFRF
EAETKEWKERGIGSIKILKHKMSGKCRVLMRREQVLKICANHYITSDMVLKPNAGSDKSW
VWYAIDYADEMPKTEQLAIRFKTADEAALFKLKFVEAQRTVPKGVDQQKEPDTKSSSLQA
SGKKLDLKTQFAKKEGEWECSVCCVTNSQFAKTCVCCSSPNPNDTTKPEAKLPGAFGNAP
AAPPSSGAFTFGISGKDTSSETISKGFGAQIPFSFKFGTQKPEAPSSQTEKKATQLDSST
DSSVSDQSPSNFSFGSGSGSGLERFAMKEGQWDCDTCFVRNEASATKCVSCQTPCSSAKS
QAAPLSSLSKFGMKEGQWDCDTCLVRNEGTSSHCVSCQQPNPKAKSSAAAPASSSSSFSF
SFSDKQSQPASTVFKTSFNPGGTFQFGQSKKESSPASFKFEPSAAKTETSSSTSSSNFSF
SMPAPSGGFKFGLSEPESKSASSFLKNIAEQHREKEKDMSSSSSLQSLDTVSNDDNPLLT
GKPNSFSFAELAKSSQGGFQFGQKDPSFIGFEGAGEQLFTAPSQDQRADILDQDEEDMYK
TEENDDIQFEPVVKMPDKVELVTGEEDEECLYSNRVKLFRFDPEIQQWKERGVGNLKLLK
NNSNGRLRVLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLANDFSDGDARLEQLAA
KFKTPELAEEFKLKFEECQRFLLDIPLQTPHKLTNSGRTAHLIQKAEEMKSGLKDLKSFL
TYDGNKAKAEESGAAVPSSTSEPMIKPLSESAGTTLEWDNYDLQKDVHDESADTSIYASP
LASSPLQKNLFRFGESSAGFSFSFQPVLSPSKSPAKLNQSRTSVGTDDEQETTQEEERDG
QYFEPVVPLPDLVDISTGEENEEVVFSHRAKLYRYDKDLNQWKERGIGDLKILQHHDTKR
TRLVMRRDQVLKLCANHWISSEMKLEPMKGTEKAWIWSAYDFAEGDGKVEQLAVRFKLQE
TANTFRDIFEKAKDAQEKGVSLASASPTEVSLPSESKAAAVCGKAAIAVLEETTRERTEQ
SYESCQTPSGKSAEARSPQSSSKNVVSPPKFVFGSDSVQKIFGSPVSSKDMAPGSPAGSS
DTTSSGASHSKTFGSSPAPTSSPFRVPERVPSQSQPDTQDAGEQSDSDVEIVFERKPTKE
QAELARRLMLPPAFFHYKNEPGYVSDGTDDEDYETAVRNLNGRLYPDSSARHARASGSVR
DSDCVLVWEKKPTLEEERLAKSLQLPPTFFCGAGSDTDTEPDRPEDFGTELRKVQQAQGE
IKGEQFTSSNKERSPATSTETAQSAAQPAADAGCPIDLSKKSNEAESLTGSNITQDSTPG
FAFNSAGGFSFADLAKNSSEFAFGTKDSSFSWANAGATVFGVSAAAAAQNENNDEEGSDD
EASNNADIHFEPIVSLPEVEVKSGEEDEEIIFKERTKLYRWDRDLNQWKERGVGDIKILF
HPGKRCYRVLMRREQVLKVCANHTITTAMDLKPMNTSANALVWTANDYTEGDAKVEQLAA
KFKTPELAESFRKSFTECQTRIGQADATLSSRITELSRPNNPVVFFTVSADDDVIGKITI
ELFSHIVPKTAENFRLLCTGEKGFGYRNSVFHRIIPDFMCQGGDITNQDGTGGKSVYGGK
FEDENFDVRHTGPGLLSMANRGRDTNNSQFFITLKKAEHLDFKHVAFGFVRNGMDVVKQM
GEMGSKSGKPSKTIKVVDCGQL
NT seq
8709 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggagtaaagccgacgtggagcgctacatctcctccgtagagagcctctccccc
gcccgcacacagaaaccagtgaaaggatttttatttgcaaaattgtactttgaagctaag
gagtatgagctggctaaaaggcatgtatctgattatttaacagtacaggtccgagatccc
aaagcacaccggttcctcgggcagctgtatgaaagagaaggagaaatagaaaaagctgta
ggatgttacaagcgctcggtggatctgaacccggctcagcgagacctggtgctgaaagtg
gctgaacttctgtgcagtaaaccagagctggacagcagagcagaattctgggtagagaaa
gctgccaagcttttgcctggtcatcctgcagtgtttgacctcagggagaagctgctgagt
gtgaagggacagcagggctggaaccagctgtatgatctgctgcagtccgagctgcagctg
cgcccctgcgacgctcatgttaacagcaagctggtgcagctctactgctccgacggccgc
ctggaggatgcggccaagcactgcctgtctgtggagaaagcgggactgctgagacacagc
ctgttctggtacaccacagccgtccagactatccaggagtacctgtctcagccgagtgta
tctgctaatgagaaagtatgtcgccgatttaaaaaagagcttttactggctcactgcagc
cttctgagactcacactttcagaaaaaggatgccaggaaagtgtggatgcacttaagact
tttgaccatgctatgcagtccttaaagtccacggccctgagtgtggcggacgaactgtcg
gaggtgtatactgaaatgaaaggtcatctgtatctgtatgctggaacactgctgctgaag
atggctgtagagaaggagcatcagtggagagctgttattcatttagcagctttctgttac
cttcttgcatatcaggttcccagaccaaagaccaggcctgagaaaggtgagcagatctca
ccgaaacctctggagtcgttagccagctatcgtcagagccaggcaggccacatgctgctg
aatctgaaccaggagacggagcacctggtgacagaggtggtggaggtgtatgggaacagg
agtgggcaggacagtctgatggagatgctgtttgggtcacaaggctctgctagctcttca
ttcattggaaacgatgtcatcagtggcattactgcacaggcacctgatatacaagaactt
aacaagtgggacagtggttctatcgtgcactatggggatctgcaatacctgacctggctg
ggcctgcagtggtctctgatgggtgaaaggccagccctgaaagagtggctgaagcagctg
ttccctcgcctcactctggagacctttaaactggacaccaatgcccccgagtccatctgt
ctgctggacctcgaggtgtttctctgtggtgtggtgttcacgagtcatactcagctgcag
gagactgcgaagatctctgccagctctcagctgcacgagccgcgctgtttacccctgcag
ctcctcaaactcctgtcctctgagagacagcgcgagtggtgggatgcagtctacagcctc
attcacaagagagcagttcctaatatgtccgctaaactgcgcatgattgtgcagcatggc
ctgaacacgctgcgcgccagagagaaacacggccttcagccagcgctgctcatccactgg
tccaggcacctcagcatagcgggggatggagtgaactcttactatgatcagaaggagtac
gtgggtcgcagtgttcactactggaatgttgttcttcctttgctggagagtattgagaag
cggcgcagcatcgctgaacctctggatccactgtttatgcattttaacagtaaggacatg
caggcttctgaagtcaaactctttgaagaggaggccatgattgcgtttgccactcttctg
gacatcgagggcaaaactgatcaggccatctccaaactcgagaagctcaactgcgtctcc
tcccactggcatcttgctcggatctatcagaggctttctgaagaggcaggaaacggcgtt
gaagaaactcaagacatgtgcatgaactttctgcgccagttcaaaaaatacttatcaaag
atctaccatgccagtgcagacgatatggaaaagctgcccgtgtcaatggaggaggtgatt
gatttactgaacgaggtgaataatcagctcggagagagcggagaggggatggaccgggtc
gacggacttccaatgacttctagccctagatctctggccgatccgaccgtggccgggtcg
cacaaattctccatgtcctctccagccaagagtgtgctttccccctccaaaagaccagtg
ttttctcccaagacgccccctcactgggtggaggaccagaaatcactcctgaagatgctc
tgtgaccaggtcgaggctttaaagaatgaggttcacgacttgaggcacaacacgtctgag
gggacagagcctccgtacagtagagtgtatacaggaaattattcaggagaaaccctccag
gagcctttttcagcacagcagaccttccatggagttccacttacagttgccaccactgga
ccttcagtttactacaatcagtcccctgcttataactctcagtatcttcttcgccctgct
gccagtgtaacaccaacaaaggctcctgtctatgcagtcaatcgtctcccgcagcaacac
atgtacgcctaccaacagccgacgcacaccccgcctctccagactgcgtgcatgtatcca
caggagcaggtctttggccccccactgaggttcgagtcccccgccacaaccctgctgtcc
ccatacagcgaagaatactgcagtcacaatgcttctcaatcatctacaaacccagccctg
ccagagcccggctacttcaccaaaccccccgccatacccgcccagtcctgtaagagcggc
gaaggcaaatcagacatgaagatgagcttcacctcccagattcctgtagaaacatctaaa
gtcccttcttttggcagtggagctgcacagatgacttcagcagggactgcttttaagttc
aattccaatttcaaatcaaacgatggcgactttaccttctcctcgtcacacttaaagaat
aacagcgaaagccttttggggctgttgacctcagacatcccacccagacctgagggacac
tctgctctcaagcctcaaacacaagaccagccggcaagccaaggtgggatctttactttc
ggcagtaaacccgccccagggttttcctttactgacggatcccaaggcaagggcatgttc
tttggaaaacctgaccaaacatttaacttcgcgaatacggccaagccaacgcctggagca
gaaaacgttgaggaaactgatgagcgatgtgtggaaagtgatggtagcacccatgttgaa
gaggatgaggatggaccccattttgagcccattgtgcctctgcctgacaaggttgatgta
aaaacaggcgaagaagaggaggaggagatgttctgtaatcgagctaaactgttccgattt
gaggctgaaactaaagaatggaaagagcgaggaatcggcagcatcaaaatccttaaacac
aaaatgtcgggtaaatgtcgagtgttgatgaggagggagcaagttctgaaaatctgtgca
aatcactacatcacttcagacatggttttgaaaccaaatgcgggatcagataaatcatgg
gtgtggtatgctatcgattacgctgatgaaatgccaaagactgaacaactggctattcgc
tttaaaactgcggacgaggctgcgctgtttaagctgaaatttgtggaggctcagagaact
gtgcctaaaggtgtggatcagcaaaaagaacctgataccaagtcttcttcactgcaggca
tctggcaaaaaattggatctgaaaactcagtttgccaaaaaggagggtgaatgggaatgc
agtgtgtgctgtgtgacgaacagccagtttgctaagacctgtgtgtgctgtagtagtcca
aatcccaatgacaccacaaaacccgaagctaaactaccaggggcattcggaaacgccccc
gctgctcctccctcttcaggagcctttacatttggaattagcggtaaggacaccagctct
gagaccatttcaaaggggtttggagctcagattccattttcctttaagtttggaactcaa
aaacctgaagcaccctccagtcagacagagaaaaaggctactcagctggattcttccaca
gacagttctgtctcagatcaaagtccatcaaatttctcatttggatctgggtctggatct
ggtcttgaacgcttcgctatgaaagagggtcagtgggattgtgatacctgctttgttcgg
aatgaagcctctgctacaaagtgtgtttcttgccagacaccttgtagcagtgcaaaaagt
caagccgcccctctcagtagtttgtccaagtttgggatgaaggaaggtcagtgggattgt
gacacttgtctagtaagaaatgaaggaacgtccagtcactgtgtgtcatgccagcaaccc
aatccaaaagcaaagagttctgccgccgccccagcatcatcgtcttcctcgtttagcttc
agcttcagtgataaacagagccagcctgcctctacagtcttcaaaaccagctttaaccca
ggcggcacttttcagtttggtcaaagcaagaaggagagctctcctgcatcctttaagttt
gagccgtctgcagctaagactgaaacatcttcaagcacttcaagctcaaatttctctttt
tcaatgccagcaccttccggagggtttaagtttggcctttcggaaccagaatcaaagtct
gcctcaagttttctaaagaatattgctgagcagcacagagagaaagaaaaggatatgagc
tcgtcctcctctctccagtctctggacacggtcagcaacgatgacaatccgctcctcaca
gggaagcccaacagctttagctttgcagagttggcaaagtcctcacagggtggctttcag
ttcggccagaaggatccctcctttataggctttgaaggagccggtgagcagctcttcaca
gctccttctcaagaccaaagggcagatatcttggatcaagatgaggaagatatgtacaaa
actgaagagaatgatgatatccagtttgaacctgtggtgaagatgcctgataaagttgaa
ctcgtcacaggagaggaggatgaggagtgtctttactcaaaccgcgtaaagctcttcaga
tttgaccctgaaattcaacagtggaaggaaagaggggtgggaaaccttaaacttctgaaa
aataactcaaacggtcgtctgagagtgctcatgagaagagagcaagtgttgaaggtatgt
gctaatcactggatcaccaccacaatgaatctgaagcccctttctggatcagaccgagcc
tggatgtggttagcaaatgatttttctgatggcgatgccagattggagcagttggccgct
aagtttaaaaccccagaacttgcagaagagttcaaactgaagtttgaggagtgtcagcgg
ttcctgctagacattcctttgcagactcctcataagcttacgaattccggcaggacagca
cacctaatacagaaggctgaggaaatgaagtctgggcttaaggacctcaagtccttcttg
acttatgatgggaataaagccaaagcagaagaaagtggcgccgcagttccaagcagcact
tctgagcccatgatcaagccactgtctgagagcgctggaactactttagaatgggacaac
tatgatttgcagaaagacgttcacgatgaaagcgcagacacgtccatatacgcctctcca
ctggccagcagccctttgcagaagaacctgttccgttttggagaatcttcagctggtttt
agcttcagtttccagcctgtacttagtccttcaaaatccccagccaagctgaaccagagc
cggacctctgtgggcacagatgatgaacaagaaacaactcaggaagaggagagggacggc
cagtactttgagccggttgtgcccttgcctgatcttgttgatatttcaactggagaagag
aacgaggaggtggttttcagtcacagagctaagctgtatcgctacgataaagacctcaac
cagtggaaagaaagaggaatcggggatctcaagatcttacagcatcatgatactaaacgc
actagactcgtgatgagacgcgaccaggtccttaaactgtgcgcaaaccactggataagt
tcagaaatgaagctggagccaatgaaaggaacggagaaggcctggatctggagtgcttat
gacttcgctgaaggagatggaaaggtggagcagttagctgtgcgcttcaaattgcaagaa
actgcaaataccttcagagatatatttgagaaagccaaagatgctcaggaaaagggagtt
tcccttgcgtctgcgtctcctacagaggtctcgttgccgtcggagtccaaagctgccgcc
gtttgtggtaaagctgccattgcagtgcttgaggagaccaccagagagcggactgaacag
tcgtacgaaagttgccaaactcctagtgggaaaagcgcagaggctcgcagccctcaaagc
agctccaaaaatgtggtttcgcccccaaaatttgtgtttgggtcggactccgtgcagaaa
atcttcggaagcccagtgtcctctaaagacatggcgcctggaagtcctgcaggttccagc
gacacgacctcaagcggtgcttctcactccaaaaccttcggaagcagtccagccccaacc
tcttctccattccgagttcccgaaagagttccttctcagagtcagccggatacacaggac
gctggagagcagagtgactcggatgttgaaattgtatttgaacgaaagccgactaaagag
caggcagagctagcccgccgcctaatgctaccgcctgcattctttcattacaaaaacgag
ccaggatacgtcagcgacgggacagacgatgaagattatgaaactgcagtgagaaatcta
aacgggagattgtaccccgactcgtctgcacgtcacgctcgggccagtggctctgtgagg
gactctgactgtgtgctggtctgggagaagaaaccaacgctggaggaagagagactagcc
aagagcctccagctccctcccaccttcttctgtggtgccggcagcgatacagataccgag
cctgaccggcccgaggacttcggaacggagctccgaaaagtacagcaggctcagggtgaa
ataaagggtgaacagtttacatcatccaacaaggagagatcacctgcaaccagtacagag
accgcccagtctgctgcccagcctgccgctgatgctggctgccccattgacctctctaag
aagagcaatgaagctgaatcactcaccggctcaaacatcactcaggattccactcctggt
tttgcgtttaactcagcaggaggattttcgttcgcagatctggcgaagaattccagtgaa
tttgcttttgggacaaaagattccagcttctcctgggcgaatgctggagccactgtgttc
ggcgtttctgcagcagctgcagcccaaaacgagaataatgacgaggagggaagtgatgat
gaggcgtccaacaacgcagacatccacttcgaaccgatagtttctctcccggaggtggag
gtgaagtccggtgaggaggatgaggagattatctttaaggagaggacgaagctctaccgg
tgggatcgggatctgaaccagtggaaggagcgaggcgtcggcgatataaagatcctcttc
catccaggtaaaaggtgctaccgtgtgctgatgaggcgcgagcaggtcctgaaggtctgc
gccaaccacaccatcacgacggccatggacctgaaacccatgaacacgtccgccaacgct
ctcgtctggacagctaacgactatacagagggcgatgcaaaggttgaacagctcgccgca
aagttcaaaaccccggaactggccgagtccttcaggaagtcctttaccgagtgtcagacc
cgtatcggccaggcagacgccaccctgtcttccagaatcacagagctttccagacccaac
aaccccgtggtgttcttcacggtctccgctgacgacgacgttattgggaagatcacaatc
gaacttttctctcacatcgttcctaaaactgcagagaacttccgacttctgtgcaccgga
gagaagggcttcggctaccgcaactcagtgtttcaccggatcatcccagactttatgtgt
cagggtggagacattactaatcaggacggcaccggggggaagtccgtttacggcgggaag
tttgaagacgagaacttcgatgtgaggcacaccggaccgggtctgctgtccatggccaac
cgtggcagagacaccaacaattcccagtttttcatcaccctcaaaaaagcagagcacttg
gacttcaagcacgtggctttcggttttgtgaggaacggcatggacgtggtgaagcagatg
ggtgaaatgggttctaagagcggcaaacccagtaaaaccattaaagttgtcgattgtgga
cagctgtaa
DBGET
integrated database retrieval system
