Astyanax mexicanus (Mexican tetra): 103044686
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Entry
103044686 CDS
T05042
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103044686
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103044686
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
TRIM_CC
zf-RING_2
zf-RING_5
Apolipoprotein
RING_XB3-XBAT31
Sina_RING
zf-RING_6
Prok-RING_4
MTUS1_CCDC69_CC1
zf-RING_10
zf-Nse
Motif
Other DBs
NCBI-GeneID:
103044686
NCBI-ProteinID:
XP_007236812
Ensembl:
ENSAMXG00000033611
UniProt:
A0A3B1J4M0
LinkDB
All DBs
Position
18
Genome browser
AA seq
482 aa
AA seq
DB search
MDRRCSLEPLEEQLRCPVCLEVFSEPLMLQCGHSYCRGCVRSMDMDPLGQLQCPVCRCAV
DGDSPPPNVALARIVDALREISGPGQGPQETCSQHHNPLSLYCEDDQALICGLCGSIGGH
RAHKVTPISSVYSRMKEDISGLMTEFQTQKRKLEEQICKMAYNKSRITNESDVLKWVVRK
EFGELRRCVELEEARFMQKVESTASTLISSIQTQADHMSQLLAKFQEAEGTLEALSNEGH
LDFITKYSSIAPRFRESQQREKRKERTYSSISFKPGFNHSDIKIAVWKRLHRRVLPAPEH
LKFDPLTAHPMLQLNEHLTSVECGVIVNRLPNNPERFSYSYCVLASRGFSSGKHYWEVQV
GQKPKWRLGLIKGTTSRKNKLTKSPEGGVWLIGLKEGRLYEAFANPRVTLPLTTHPQRLG
VFLDYERGEMTFYNADSPDELVTIYSYQAELQGKVYPLFDVCWHERSANKLPISLPQPLA
EV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggacagacgctgcagtctggagccactggaggagcaactgcgctgcccggtgtgtctg
gaggtcttctctgagcctcttatgctgcaatgtggtcactcctactgtcgtggctgcgtc
cgctccatggacatggaccctctgggccagcttcagtgtccagtctgccgctgtgcagta
gatggagacagtcctccacctaatgtggctctggcacgcatcgtggacgccctgcgggag
atcagcgggccaggccagggcccccaagagacctgcagccagcaccacaaccccctgagc
ctttactgcgaagatgaccaggcactcatctgcggcctgtgtggaagtattggaggacat
cgagcacacaaggtcacccccatcagcagcgtctacagccgcatgaaggaggacatttcg
ggtttgatgactgaatttcagactcagaagagaaagctggaggagcagatctgtaaaatg
gcctacaacaaatctcgcattactaatgagtctgacgtactgaagtgggtggtgcggaag
gagtttggagagttgcggcgctgtgtggagctggaggaggcccgcttcatgcagaaggtg
gagagcaccgcctccactctcatctcctccatccagacccaggctgaccatatgagccaa
ttactggccaagttccaggaagccgaaggcacactggaagccctgagcaacgagggccat
ctggactttatcactaaatacagctccattgctccaaggtttagagaaagccagcagaga
gaaaagaggaaggagagaacctacagctccattagcttcaaaccaggcttcaatcacagt
gacatcaaaatcgctgtgtggaagagattacacaggagagttctgccagctcctgagcat
ctgaagtttgaccctctcacagctcatcccatgctgcaactcaacgagcacctcacgagt
gtggagtgcggtgtcattgtgaaccgcctgcccaataatccagagcgcttcagctacagc
tactgtgtgctggccagtcgcgggttctcctcagggaagcattactgggaggtccaggtg
ggccaaaagccaaagtggcggctcggcctaatcaaaggaaccacatcgcgcaagaataag
ctgaccaagagcccagagggtggagtttggctgattgggctgaaggaaggccgactgtac
gaggcttttgctaacccacgagtcacgctgcccctcacaacccatccccagcgcctgggg
gtcttcctggactatgaaagaggagagatgacgttctacaatgcggacagtccagacgag
ctggtaactatctactcctatcaggctgagctgcaggggaaggtgtacccgctgtttgac
gtatgctggcatgagcgcagtgccaacaagctgccaatctctctgccccagcctcttgcc
gaggtgtga
DBGET
integrated database retrieval system
