Astyanax mexicanus (Mexican tetra): 103044706
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Entry
103044706 CDS
T05042
Symbol
arap1a
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103044706 (arap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103044706 (arap1a)
Membrane trafficking [BR:
amex04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
103044706 (arap1a)
Endosome - Golgi transport
Arf GTPase associated proteins
103044706 (arap1a)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
103044706 (arap1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
PH_11
PH_3
RA
PH_8
PH_6
Ank_2
Motif
Other DBs
NCBI-GeneID:
103044706
NCBI-ProteinID:
XP_049333210
LinkDB
All DBs
Position
1:complement(38287998..38536674)
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AA seq
1102 aa
AA seq
DB search
MAKKEEEKSRTLRNFRSLSVEEDRRHSFFMRDREESIDLPCSHFPDYPKDSHPEPVVKSG
WLDKTPPKGGKRFQRRWVQLDHKYLRYFQNSKEVYSKRMISLQCVSAVQPAGDQRFELIT
LNRTFLFKTESNQMRNEWIKSLEEVLSSRPQSQHKARSEWIKSLEEVLRRRQQNGGGGVF
FKSYLAKTEGLLEMTSPRTKVYTVINNNRIYLFKNRQEYMNGLGITDIDLSKASLKESSK
SFSVITPYRTFSFVVESEAERQRWCACLAECVRSSAPVSRVCEKLWSKEFNRVCADCGAD
SPEWASVNLCVLLCERCADAHRCLGPSVSKVFSLKGNDQLWTEDLIKLFLQLGNGKVNSF
WAENIPSSEILNVESSSSERLAYATAKYLKGTFRKQHHLSGQQEALNNALCAAVKGSNIV
ETFRLLFSGADINSSTGIPEFPTPLALAMHSGQTNQVELLKHNQKSDTVKSEVNTAPSLS
GYLFKVASANRPITEQKPRSEFTQRWCSLNAGMFTYYKTEQMTHRCGSMKTSEIICLSLN
SPGNHGFEHTLEIYTDAGRVYLFGADDIVTIKEWFRAISMAMLPTALSSVCGLCDRLGRL
LCTEGSLGTGWFCLSGSMLQVLLEDSVQDINLLRLHTLTIGDGAGDVVLGWRGGYVHLSF
DQRPHFPGWISSLRRGAGSGNEMLSQQQLTKSGIPITVQRCIEYVTRHGLMSAGIYRKSG
TTSRVSALLDSFQQDARNVCFSDKFGVDDVASTLKRFLREVKGGVFNGEDNSRNWLKVAD
VSHHRAKLSMYQNLLSELPEVNRETLKVLLNHLYCVHHLSEFNQMTMGNLGIVFGPTLFQ
TDGSDPRTYTVVEEMIQNYCAIFNVPEEELQKELDATSLILNKINDQTSSKFAPSLSICA
VYIEKKEEGAELLVQVGSNVTAKQLVLQVLEMRGIEPFAEEMWTCYEVQEKEEMERELHF
EEKVLPLYFSLGPDCHLLVKKSQYSNDIKNYLSGKNEVYKVGTLRVCEVKGDKNRNFISH
QCELTKGTLKLYKDKESSLCEKEWSVQEGTLYYGYRSKLSPPTPWGLTLVCGQQQWYFCC
DNEDEFIEWMATFLSLQCGENR
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaggaggaagaaaaaagccgcactctgcgaaacttccgcagcctttcagtg
gaagaagacagaagacattccttctttatgagagaccgtgaggagagcattgatctgccc
tgttcacattttccggactatcctaaggattcacacccagagcctgttgttaaatcaggt
tggcttgataaaactcctcctaaaggggggaagaggtttcagagacgatgggtgcagctg
gatcataaatatctgagatattttcaaaacagcaaggaggtgtactctaagcggatgata
tctctgcaatgtgtgagtgcagttcagcctgctggcgatcagcgattcgagctcatcact
ctgaaccgaacatttttattcaaaacagaatccaaccagatgcgaaatgaatggataaaa
agtctggaggaagttctgagtagtcgaccgcaatctcaacacaaggcgcgaagtgaatgg
ataaaaagtctggaagaagttctgcgtcgtcgacagcagaatggcggtgggggagtgttt
tttaaatcttatttagccaaaactgagggtttgttggagatgacgtccccacgcactaaa
gtctacactgttatcaacaacaacagaatttatctgtttaaaaatagacaggagtacatg
aatggtttgggcatcactgatattgatctgagcaaggcgagcttgaaggagtccagcaaa
tccttcagtgtcatcaccccctaccggaccttcagttttgtggtggagtctgaagctgag
cggcagcggtggtgcgcgtgtttggcggagtgtgtgaggagttcagcaccggtttccaga
gtgtgtgagaaactttggagtaaggagtttaaccgtgtgtgtgcagactgtggcgctgat
tcgccagagtgggcctcagtcaacctgtgtgttctgctgtgtgaacgatgtgcagatgcc
cacaggtgtttggggccctctgtgtctaaagtgttcagtctgaaggggaatgatcagctg
tggactgaagatctgataaagctgtttctgcagctaggtaatggtaaagtaaacagtttc
tgggcggaaaacattcccagcagtgagattctgaatgtggagtccagcagcagcgagcgg
cttgcctatgccactgcaaaatacctaaaaggaactttccggaaacagcaccatctctcc
ggccagcaggaggcgctcaacaatgcgctgtgtgctgcagtaaagggtagtaatattgtg
gagactttccgtctgctgttttcgggtgcagatataaacagctccactggtatcccagaa
ttccctactcctcttgcccttgcaatgcacagtgggcaaacaaatcaggtggaactgctg
aaacacaaccagaaatcagacactgtgaagtcagaggtcaacactgcaccctctctgagc
gggtacttgttcaaagtggcttccgctaatcgaccaatcacagagcagaaacccagatca
gagttcacccagaggtggtgctccctcaatgccggcatgttcacctactataaaaccgag
caaatgactcaccggtgtggcagtatgaagacaagtgaaatcatctgcttgtctctcaac
agcccagggaatcatgggtttgaacacacccttgaaatatacacggatgcgggacgggtc
tacctatttggagctgatgacatcgtcactatcaaggagtggtttagagctatttccatg
gctatgcttcctacagctctcagtagtgtgtgtggactctgtgatcggctgggtcgtctg
ctgtgcactgaagggagcttagggaccggctggttctgtctgagtggctccatgctgcag
gtccttctggaagactctgtacaggacatcaaccttcttcgactacacacactgactata
ggcgatggtgcaggagatgtggtgttggggtggagggggggatatgtgcacctctctttt
gaccagaggccgcatttccccgggtggataagctcgctccggcggggtgcaggatccgga
aatgagatgctgtctcagcaacagctcaccaaatcaggaataccaatcaccgtccagcgc
tgcatcgaatacgtcacccgccatggtctcatgtcagcagggatctatcggaagagtgga
accacctcaagagtgtcagcactgctggatagtttccagcaagacgcacggaatgtatgt
ttttccgacaagttcggggtggacgatgttgcaagcaccctaaaacgcttccttagagag
gtcaaaggtggagtgtttaatggggaagataactcacgaaactggctcaaggttgcagat
gtatctcaccaccgtgctaaactcagcatgtatcagaatctactgtctgaactgcccgag
gtgaacagagagacactgaaagttctactcaaccatctctactgtgtgcaccatctgtcc
gagttcaatcagatgaccatggggaatctgggaatcgtgtttggaccaacactctttcag
actgatgggtctgacccgaggacctacacagtagtggaggaaatgatacagaattactgt
gccatctttaatgtcccagaggaggagcttcagaaggaactggatgcaacttctctcatc
ctaaacaaaatcaatgaccagacatcctcaaagttcgccccctcgctcagcatctgcgct
gtttatatcgagaagaaagaggaaggggcggagctacttgtgcaggtgggtagtaatgta
acagcaaagcaactggtgttgcaagtgttggagatgcggggaatagagccctttgcagaa
gaaatgtggacctgctatgaggttcaggagaaagaagagatggagagagagctgcatttt
gaggaaaaggtgctgccgttgtatttctcattaggcccggactgccacctgttggtcaaa
aagagccagtacagcaacgacatcaaaaactacctcagtggtaaaaatgaggtgtataag
gtgggaacactgagagtgtgtgaagtaaaaggagacaaaaacaggaacttcatcagccac
cagtgtgagctcaccaaagggactttaaaactgtataaagacaaagagagctcactgtgt
gagaaggagtggtctgtgcaggaagggacgctctactacggctacaggagcaaactatcc
cccccaacaccatggggtctaactctagtgtgtggtcagcagcagtggtatttttgctgt
gacaatgaggatgagtttattgagtggatggccacctttctgagccttcagtgtggtgag
aatcggtga
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