Astyanax mexicanus (Mexican tetra): 103044762
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Entry
103044762 CDS
T05042
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103044762 (mms19)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103044762 (mms19)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103044762 (mms19)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
103044762 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_2
Sec7-like_HUS
Hpt
Motif
Other DBs
NCBI-GeneID:
103044762
NCBI-ProteinID:
XP_049321110
Ensembl:
ENSAMXG00000003029
LinkDB
All DBs
Position
15:9104721..9141328
Genome browser
AA seq
1027 aa
AA seq
DB search
MAAESAQLAGLVEEFVAGQVDSKAADVAAGVKAGNFNILELVEALGISLTSSQSQTRGRG
VQLLSEVLQECYSGLSEREVEVLIAFYENRLKDHYAITPHVLRGLKALAKSTVLPPGSAV
SILRSLFQDVNVQSLMLAERSCVYNMLISLMGSREDELKGLGPDFVFGFVQAVDGERDPR
NLLLAFQIARNIIHRGYDLSQFTEEFFEVTSCYFPIDFTPPPNDAHGITQEELILALRGV
LTGTPRFAEFLLPLLIEKLDSDVQNAKVDSLQTLAACSPAYGHKELAEFLPGLWSSIRRE
VFQTASERVESAGLAALAALTSCLSRSVLTSDSEDALQTFLDQVLKDCQHHLYEPDLKLV
WPSAKLLQAACGASYRSSLIVTAAVLPTLLDQYSSRTQCAQRRTLLEVLHGFIQPTPSSR
PAEGEESVLLPFQVSLCSAVFSALAESSAGLQITATKVLATMGQQPGLLAESEVEKVVDH
MTRLVLEEEDAQVSLAVVECVGSLSRLHPAAFTSRMVPRLKEEIFSEKSDDAAPSQGQCR
GAVRQRCVAALAAVSTQPVLVRESAPVLLQVLSSVHSGSSSFSVEEVTSVCHSLQRIAEQ
AGGVEEIGRFFHDAVIPQLLALTLQAALQSLKSSDHSSALTQEAVLSAVVPVISTACAAL
QTDLAAKMAAQVVSLFLDGDVSFLPDNAYPSQIQLLKSQSESWTQSQLVCLLMGCVCSLP
RSVDVPDVDRLLGQLEELSCSCSHAFSYTSAAKCFAGLINKRAAGQALDAVVEKTLERIR
TTLDCESSAHRIQAFTLLVWVAKALLLRYHPLSAVSTDKIFSLLSDPQLGSQAADSFSLL
MSDSPDVLNRSCHADVRIMYRQRFFAENSAKLVQGFNCAEQESKSVYLKALSHIVNNLPR
QVQLSELPALLPLLLEALSCPDQAVQLSTLSCLQPVLLDPPPALTTQLEALFSRLLALTS
SPAMKVRMAALRCVHALSRLPEHMVLPFRARVLRALAPPLDDKKRLVRKEAVSARGEWFL
LGSPGGR
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaaagcgctcagttggccgggctggtggaggaattcgtggcgggacaggtg
gacagcaaggccgcggacgttgcggcaggtgtcaaagctggaaactttaacatactggag
ctggtggaggctcttgggataagtctcacgagttctcagtctcagacgcgaggcagaggg
gtccagctcctctctgaagtcctgcaggaatgctacagcggcctatccgagagggaggtg
gaggtcctgattgccttctacgaaaacaggctaaaggatcactatgcgatcacaccgcac
gttctccgaggactcaaggccttggcgaagagtacagtgctgcctcctggttctgcagta
tccatcctgagatccctcttccaggatgtaaatgtgcagtccctgatgttggctgagcga
tcgtgtgtctacaacatgctgatcagcctcatggggtccagagaggatgagctgaagggt
ttgggcccagacttcgtttttggatttgttcaggctgtagacggagagagagatcctcgt
aacctcctgctggcgttccagatagcaagaaacatcatccacagaggctacgacctcagt
cagtttacagaagaattttttgaagtcacatcctgctacttccccatagacttcacacct
ccacccaacgatgctcatgggatcacgcaggaggagctcatcctggctctacggggagtt
ctgacagggacgccgcggttcgcagagttcctcctaccgctcctcattgagaagctggac
tcagacgtgcagaacgctaaagtggactctctacagacgctggctgcctgctctcctgca
tacggacacaaagagctggccgagttccttccaggcttgtggtcatccatccgcagagag
gtgttccagacggcgagtgagagggtggagtctgcaggtctggctgctcttgctgcgctc
acctcctgcctgtcccgctctgtcctcacctcggactctgaggatgctctgcagacgttc
ctggaccaagtcctcaaagattgtcagcaccatctgtatgagccggacctgaagctggtt
tggcccagtgccaagctgctgcaagctgcctgcggcgcctcctacaggtccagcctgata
gtgactgcggcggtgctgcccaccctgctggatcagtacagctccagaactcagtgtgcc
cagcggcgcactctgctggaggttctgcatggattcatccagcccactccgagcagccgg
cctgcagagggagaggagagtgtgctgctgccctttcaggtgtctctatgcagtgctgtg
ttttctgctctggctgagtcgagtgcaggcctccaaatcactgctaccaaagttctcgcc
actatggggcagcagcctggcctgctagcagagtcggaggtggagaaggttgtggatcat
atgaccagactagttctggaggaggaggatgctcaagttagtttggcagtggtggagtgt
gtgggatcactgtcccgtctccatcctgcagctttcacctcccggatggttccacgactg
aaggaggaaatattctcagaaaaatcagatgacgccgctccatcgcagggtcagtgtagg
ggagctgttcggcagcggtgtgtggcggcgctggctgctgtgtccactcagccggtactg
gtgagggaaagtgctccggttctgctgcaggttctgtcttcagtgcattcaggtagcagc
agtttctctgtagaggaagtgacctcagtgtgccacagtctgcagaggatagctgaacag
gccggaggtgtggaggagataggccgctttttccatgatgcagtcattcctcaactgctg
gcactgacccttcaggcagctctgcagagtctgaagagctcagatcacagcagcgctctc
acgcaggaggctgtactgtctgctgtagttcctgttataagcactgcctgtgcagcactg
cagacagaccttgctgccaagatggctgcccaggtcgtgtccctcttcctggatggagat
gtctccttcttgccggacaatgcctacccatcccaaatccagctgctaaaaagccagtct
gagtcgtggacccagtctcagctggtgtgtctgctcatgggctgtgtgtgttcactccct
cgcagcgtggacgttcccgacgttgaccggctgctgggacagttggaggagctgagctgc
tcgtgctcacacgcgttctcctacacgtccgccgccaagtgcttcgccggcctgatcaac
aagagagcagcaggccaagccctagatgctgttgtggagaagactctggaaaggattaga
acgacattagactgtgaatcttctgcccatcggattcaagccttcaccttactagtctgg
gtggccaaagccctgcttctgcggtatcatcccctatcagcagtttccactgacaagatc
ttctccctgttgagtgatcctcagctgggttctcaggccgccgacagtttctccctcctc
atgagcgactctccggatgtgctgaaccgcagctgccacgcagacgtgcgcatcatgtac
agacagcgcttcttcgccgagaactcggccaaacttgtgcagggcttcaactgcgcggaa
caagagagcaagtctgtgtatctgaaggccttgtcacacattgtaaataatctgcccaga
caggtccagctctccgagctgccggcgttgctgccgctgctgctggaggcgctgtcgtgt
ccggaccaggcggtgcagctctccacactgtcctgccttcagccggtgctgctggacccg
ccccctgccctgaccacacagctggaggccctgttctcccgcctgctggctctcacctcc
agccctgctatgaaggtgaggatggcggctctgcgctgtgtccacgctctctcccgcctc
cctgaacacatggtcctgccgttccgtgccagagtgctgcgggccctggctcctcctctg
gatgataagaagaggctggtgaggaaggaggcggtgtctgcccgtggagaatggtttttg
ttggggagtccaggaggaaggtga
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