Astyanax mexicanus (Mexican tetra): 103044817
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Entry
103044817 CDS
T05042
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04217
Necroptosis
amex04622
RIG-I-like receptor signaling pathway
amex04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
103044817 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103044817 (cylda)
04625 C-type lectin receptor signaling pathway
103044817 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
103044817 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103044817 (cylda)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103044817 (cylda)
Peptidases and inhibitors [BR:
amex01002
]
Cysteine peptidases
Family C67
103044817 (cylda)
Ubiquitin system [BR:
amex04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103044817 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
103044817
NCBI-ProteinID:
XP_007244893
Ensembl:
ENSAMXG00000018616
UniProt:
A0A8B9J9R1
LinkDB
All DBs
Position
23:complement(11798736..11831356)
Genome browser
AA seq
953 aa
AA seq
DB search
MSSALWSQEKPAGGFRDDWRFYIVVKECVVEKPPQKTLRIPRGSLGQACQERNSLGRPLP
PSKGKRSLRILDQTNVVVSVDERDVLELDEKLAELLFPITNCEERYGLLCNKPRLDRARE
IDSGSKVRVQLRSGDEPLPGVVRFKGALLPDRALSGIWFGVELLEEGRGQGFTEGSYQGQ
QLFRCEDECGVFVALDKLELWEDEELEVDHVTLVDNDPEVEGEFPPLEVNSRVLVQTREG
PERGTVIFCDLLPGNETLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICDVM
PEYSMQDPRLSKPSFTSRGSCEKPGGQGKPKNKGVGLQAASRSKSEFYYTLNGSSVDHPA
QSKSKSTWYIDEVGEDPAKSLTETPPDFNQASPPPRAPPTAVSLSSDNKFHSLPFSLNRK
SGPNGSMSHGPLSLSVQSVMGEQQEIPPPVTAPSPRPSSPPKGQPGLEVGSLVEVKENPP
LCGVIRWVGLPPGLLEPLAGLELEEECVGCTDGTFKGTRYFTCPPKKALFVKLKCCRPDS
RFPSQHHSPNPIERCNSIAFGGYLSEVVNENTPPRTENDGLEVMVGKKKGIQGHYNSCYL
DSTLFCLFSFSSVLDTVLLRPKSKTDVEYYLETQELLRTEIVNPLRIHGYVCATKIMKLR
RILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMDKKD
KVLVPTSQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDLLED
TPRECRICGGLALYECRECYEDADITAGKIKQFCEKCNTQVHLHPRRKTHRYGKLSVPKE
LQEGVWRQGSFPHQQMELFAVLCIETSHYVAFVKYGAADSAWLFFDSMADRDGGQNGFNI
PQVSPCPEVGAYLKMTPEELHALDPKNIQGYARRLLCDAYMCMYQSPTMSLYK
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggcgctgtggagccaggagaagccggcgggtggcttccgcgatgactggcgc
ttctacattgtggtgaaggagtgtgtggtggagaagccgccgcagaaaacactgcgtatc
ccgcgtggcagcctgggccaggcatgccaggagcgcaacagcctgggccgcccgcttccg
cccagcaagggaaagcgcagcctgcgcatcctggaccagaccaatgtggtggttagcgtg
gatgagcgggacgtgctggaactggatgagaaactggctgagctgctgtttcccatcacc
aactgcgaggagcgctatggtctgctgtgcaacaagccacgtttggacagggcccgcgag
atcgactccggctccaaagtccgagtgcagctgcgctctggtgacgaacctctgcctgga
gttgtcaggtttaaaggggctctgctgcctgacagagcgctctctgggatatggttcggt
gtggagctgctggaggaaggtcgtggacagggttttactgagggttcatatcaagggcag
cagctgtttcgctgtgaggatgagtgcggggtctttgttgcacttgataaactcgagctt
tgggaggatgaggagctggaggtggatcatgtgacccttgtggacaacgacccagaagtg
gaaggagagttcccgccgctggaggttaactctcgtgtgctggtgcagactcgggaaggg
cctgaacgaggaaccgtcatcttctgcgacctgttacctggcaacgaaacactggggtac
tatgttggagttgatatggacaatcctatcggagactgggatggcgtgattgacgggaag
ctgctgtgtaatttcgccagcctcgagcatacccgcctcgtgcccatctgtgacgtcatg
ccagagtactccatgcaggatccgaggctgtccaaacccagctttacttcgagaggcagc
tgtgaaaagcctggtggtcagggcaaaccaaagaacaaaggggtaggtctgcaggctgcc
agcagaagcaagtcagaattttattatactctaaacggcagctctgttgatcatccggcc
cagtccaaatccaaaagcacatggtatatagatgaagtaggcgaagacccggccaagtcc
ctgactgaaacgcctcccgacttcaaccaggcctcgccccctcccagagccccgcccact
gccgtctcgctgtccagcgacaacaagttccactccttacccttcagtctgaatcgtaag
agcgggcccaatgggagcatgagccatggaccgctctccctttccgtccaatccgtgatg
ggagagcagcaggagatcccgccccctgtgactgccccttctccaaggccgtcatctcct
cctaagggtcagccggggttagaggtggggtctctggtggaggtgaaggagaatccacct
ctgtgtggggtgatacgctgggtcggcctgccgccgggactactggagcctcttgcgggg
ctggagttggaagaagaatgtgtaggatgcactgatggcacatttaaaggcacgcgctac
tttacctgtcctccgaagaaagctctcttcgtcaagttaaaatgctgccggcctgattct
cgcttcccttcacaacatcactcgcccaatccaatcgaacgatgcaattctatagcattt
ggaggttacctgagtgaagtggtgaatgaaaacactccccctcgtacagagaatgatggg
ctagaggtgatggtggggaagaagaaaggcattcagggccattacaactcctgctaccta
gactcaacactcttctgtctgttctcgtttagctctgtgttggataccgtattactgagg
ccaaagtctaagactgatgtagaatactacttagagacacaggaactgttacgcactgag
atagtcaacccactgcgcatacacggttatgtgtgtgcgactaagataatgaagctgcgg
agaatcctagagaaggtggaggcagcatctggcttcacatctgaagagaaagatccagag
gaattccttaacattctttttcaccacattctgagggtggacccattgctcaaactacgc
tctgctgggcaaaaggttcaggactgttatttctaccaaatcttcatggataaaaaggac
aaagtgctagtgcctactagccagcaactgctggagtggtccttcatcaacagtgacctc
aagtttgctgaggctccgtcctgtctgatcattcagatgcctcggttcgggaaggatttt
aaaatgtttaataagattttcccttccctggagctggacatcacagatctcctggaagac
acgccaagagagtgccgtatctgtggggggttagctctgtatgagtgcagggagtgttat
gaagatgctgacatcacagccgggaagattaagcagttctgcgaaaagtgcaatacacag
gtgcatctgcacccgcggcgtaagacccatcggtacggaaagctatcagtgcctaaagag
ctgcaggagggtgtttggcgtcagggttcctttccccaccagcagatggagctgttcgct
gtgctctgcatcgagaccagtcactacgtcgccttcgtcaaatacggcgctgccgactct
gcctggctcttcttcgacagcatggccgaccgagacggtgggcagaacggttttaacatc
ccgcaggtgtccccgtgtcctgaagtgggggcttacctgaagatgactccagaggagctg
cacgccctggaccccaaaaacatccagggctacgcccgccgcctgctctgtgacgcttac
atgtgcatgtaccagagccccaccatgagcctctacaaataa
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