Astyanax mexicanus (Mexican tetra): 103044893
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Entry
103044893 CDS
T05042
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103044893 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103044893 (nup85)
03036 Chromosome and associated proteins [BR:
amex03036
]
103044893 (nup85)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103044893 (nup85)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103044893 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Eplus_motif
Motif
Other DBs
NCBI-GeneID:
103044893
NCBI-ProteinID:
XP_022538629
Ensembl:
ENSAMXG00000042274
LinkDB
All DBs
Position
3:17654657..17681055
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AA seq
653 aa
AA seq
DB search
MEEVDVEPTTTLIPGVGLRQRHVGFEWGPGDILVYETNFKLQGAGSARSGTPSVHVVRKD
EDIYSPILRKLFNESHHIFVGLQNIQEDLPSKNKKPQFVSISKNYRSVIRACMEELQQGA
VSAQDTSVIAQYSNQVSILLAIELIWNLCEVLFIDAAPAGVLLLHLLDWVRLHKADVDER
AREVLQSESPTHHHAYWEVVISFVLQGRMDEARQVLVKQANLQPASRPIYQLMDSLLQKM
PIFNPGGTQTLTEFDVKWRHWHEECDRCLQDNSFASNRHLETICKILVGDEDTMLEHKEL
LGTWYHFLVSRLLFFHPTVKPSELHYYAQSSMDMFLDFRSAPEPLDSILLAAFEFDIHQV
IKDCSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLVLEYASGLFSHHSLWQLA
VDYFDHCPEFGRVYLELQLERVPLETERKALKVLRICEQRQMNEQVRSICKIMAKRALSN
NRLGSALSWSIRAKDAAFATLISERFLQDYCKRGSFSDLDLIDNLGPAMLLSDRLTFLGK
YREFHRLYGEKRFTEAAKLLLSLMTAKIAPRSFWMTLLVDALPLLEQKEVIFSVDQTHEL
MFCLEELTSDNSDGKPEQSAQDEDIESTKLELLRLALARNLAMAIVKEGTVEA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtggatgtagagccgaccaccacgttaatcccgggcgtggggctcagacag
aggcatgtagggttcgagtgggggcctggagatatcctggtgtatgaaacgaacttcaaa
ttgcaaggtgctggttctgcacggtctggtactccctcagtccacgttgtgaggaaagat
gaagacatttactctcccatcctgcgcaaactcttcaatgagtcacatcatatctttgtt
gggctccagaatatccaagaggacctgcccagcaaaaacaagaaacctcagtttgtcagc
atcagtaaaaactacagatcggtgatacgagcgtgtatggaggagctccagcagggtgca
gtgtcagctcaggacacatctgtaatcgcacagtacagcaatcaggtgtccatccttctg
gcgattgagctcatctggaatctgtgtgaagtgcttttcattgatgcagcaccagctggc
gttctgctgctgcacctgctggactgggtgcgtttgcacaaggctgatgtggatgagagg
gccagggaggttctgcagagtgaaagccccactcaccatcacgcctactgggaagtggtg
atcagttttgttctgcagggacgtatggatgaggctcggcaggttctggtaaagcaagca
aatctgcagcccgcctccagacccatctaccagctcatggacagcctgctgcagaagatg
cccatatttaatcctggtgggactcagacacttacagagtttgatgtgaagtggaggcac
tggcatgaagagtgtgaccgctgtctccaagacaactcctttgctagtaaccgacacctg
gaaaccatctgtaagattctggttggtgatgaggacaccatgttggagcacaaggagctt
ctgggcacctggtatcattttctggtcagccggctgctcttcttccacccgacagtcaaa
ccatctgagctacactattatgcccagtcaagtatggatatgttcctggacttccggagc
gcccctgagcctctggacagtatccttctggctgcttttgaattcgatatccatcaggtc
atcaaagactgcagcatcgccctcaacaactggtggtttgtggctcacttgacggacctg
ctggaccactgcaagctcctgcaatctcacaacctccattttggttctaacctgagggag
ttcctggtgctggagtatgcctctggactcttttctcatcacagtttatggcagctggcg
gtcgactactttgaccactgccctgagtttggtcgtgtgtatctggagctgcagctcgag
cgtgtgccgctggagacggagcgaaaagctttgaaagtgttgaggatctgtgagcagagg
cagatgaacgagcaagtgcgcagtatctgtaagatcatggcgaagcgggctctcagtaat
aatagactgggctctgctctgtcctggagtatccgagctaaagacgctgccttcgccact
ctcatctccgagaggtttctgcaggattactgtaagaggggctctttctctgacctggat
ctgattgacaacctggggcccgccatgctgctgagtgacagactcacattcttagggaaa
taccgggagttccacagactttatggtgaaaaaaggtttacagaagcagccaagcttctc
ctgtccctaatgacggccaagatcgcccccagaagcttctggatgaccctgcttgttgac
gcactgcccctcctggagcaaaaagaggtgatcttctccgtggatcagactcatgaactc
atgttctgtctggaggagctgacctcagacaacagtgatggcaaaccagagcagtcagca
caggatgaagatatcgagtccacaaagctggagctattacggttagctcttgcccgtaac
ctagccatggccatagtaaaggaggggactgtcgaggcctga
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