Astyanax mexicanus (Mexican tetra): 103044921
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Entry
103044921 CDS
T05042
Symbol
srsf6a
Name
(RefSeq) serine and arginine rich splicing factor 6a isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
amex05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103044921 (srsf6a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103044921 (srsf6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103044921 (srsf6a)
Spliceosome [BR:
amex03041
]
Common components
Common spliceosomal components
SR proteins
103044921 (srsf6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
103044921
NCBI-ProteinID:
XP_022532500
Ensembl:
ENSAMXG00000003101
LinkDB
All DBs
Position
13:complement(47336158..47345588)
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AA seq
385 aa
AA seq
DB search
MPRVYIGRLSYHVREKDIQRFFSGYGKLLEVDLKNGYGFVEFEDTRDADDAVYELNGKEL
CGERVMVEHARGPRRDRDGYGGGGYYGGGRSGYSSRSRSGRDKYGPPVRTEYRLIVENLS
SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSQSDMRRALEKLDGTDINGRKIRL
VEDKARRSRRSYSGSRSRSRSRRRSHSRSRRSSHSRSKSRSRSRSHSRRHHSRSRSNHKS
RSRSGRKSRSKSPSSKSRSRKSHSRSRTHKSRSRSASRKSRSRSDTRKSRSKSTSKVKSE
RGSRGQSKEKSSSKKSRSRTASPAENGNEERDKSASRSPSPQAEKSGSKSPERASRSRSR
SRSKTASHSKSRSRSRSRSRSASQD
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgccacgggtttatatcggccgtttgagctaccacgtccgggagaaggacatccagcgg
ttcttcagcggctacgggaagctgctggaggtggatctgaagaacgggtacgggtttgtg
gagttcgaggacacgcgggacgcggacgacgccgtgtacgagctgaacgggaaggagctg
tgtggagagagggtgatggtggagcatgcgaggggaccccggcgggaccgcgatggatat
ggtggagggggttattatggaggaggtcgcagtggatacagcagcaggagtcgctctggc
agggataagtacgggcctccggttcgcacagagtaccgcctcattgtggagaatctctcc
agccgctgcagctggcaggacctgaaggacttcatgcgtcaggccggggaggtgacctat
gcggatgcccataaggagcgcaccaacgagggggtcatcgagttccgctcccagtctgac
atgcggagagctctggagaaactggacggcacagacatcaacggcaggaagatccgcctg
gtggaggacaaggcgcgccgctctcgccgttcgtactctggaagtcgctcgaggtcccga
agccgccgccgctcgcacagcagaagccgcagaagcagccactcccggagcaaatcaagg
tctcgctcaaggtctcattcccgccggcaccactcccgttccaggtccaaccacaagtcc
cgctcccgctcaggccgcaagtcccgctccaaatctccctccagcaagtcccgctctcgc
aagtctcactctcgctcccgcactcacaagtcccgcagccggtcggctagccgcaagtcc
cgctctcgctctgacacccgcaagtctcgctccaagagcacctccaaggtgaagtctgag
cgtgggtctcgcggccagtccaaggagaaatccagcagtaagaagtcccgcagtcgcact
gcctcacctgctgagaacggcaacgaagagcgcgacaagtccgcctctcgctcgccgtct
ccccaggccgagaaaagcggctcaaagtctccggaacgagcttcccgctctcgatcacgc
tcacgatccaaaaccgcatctcactctaaatccagatccaggtccagatctagatctagg
tccgcctcccaggactag
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integrated database retrieval system
