Astyanax mexicanus (Mexican tetra): 103044942
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Entry
103044942 CDS
T05042
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03020
RNA polymerase
amex04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103044942 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
103044942 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103044942 (polr3b)
Enzymes [BR:
amex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103044942 (polr3b)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
103044942 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
103044942
NCBI-ProteinID:
XP_007250603
Ensembl:
ENSAMXG00000020163
UniProt:
A0A8B9L4E6
A0A3B1INH5
LinkDB
All DBs
Position
9:complement(20845473..20876211)
Genome browser
AA seq
1132 aa
AA seq
DB search
MDLLREDFGELSAQQLAAPVSTVEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKVTSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDAPIAIIF
KAMGVESDQEIVQMIGTEEHVMAAFAPSLEECQKAQIFTQTQALKYIGNKVRRQRMWGGP
KKTKMEEARELLASTILTHVPVKEFNFRAKCIYLAVMVRRVILAQGNNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPTVFLVFL
NGNILGVIRNHQKLVSTFRLMRRAGFINEFVSISTNVTDRCVYISSDGGRLCRPYIIVKN
GQPAVKNKHIEELSQGYRNFEDFLHESLVEYLDVNEENDCSIALYEHMITKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQRPMVK
TKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLRR
YTNQTFDKVMGPMLDAETRKPIWRHSILDADGICSPGERVENKQVLVNKSMPTVTQTPLE
GSTQPGQPQYRDVPITYKGSTDSYIEKVMISSNAEDAFLVKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSRYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggacctgctgagggaggattttggggagctgtcagcccagcagctcgcggctcctgtc
agcacagtggaggaaaaatggaaacttctccctgcctttctgaaggttaaaggtttagtt
aagcagcacattgactcctttaactacttcatcaacgtggagataaagaaaatcatgaag
gccaatgagaaggttacaagtgatgctgatccaatgtggtacctaaagtaccttaatatc
tatgttggcatgcctgatgtagaagagagctttaatgtaaccagacctgtgtctccacat
gagtgtcgtctgagagatatgacctattccgctcccattacagtggacatagagtacacc
agaggcagccagaggatcatccgtaatgcacttcccattggaagaatgccaattatgttg
cggagctccaactgtgttttgacaggcaagacacctatggagttttctaaactcaatgaa
tgtcccctagatccaggtggttatttcattgtaaagggtcaggagaaggtcattcttatc
caagaacagctttccaagaaccgcattattgtagagcaagatcgcaagggtgcagtggga
gcctctgttaccagctccactcatgagaagaagagtagaactaacatgattgtgaagcag
ggccgtttttacctgaagcacaacacactttctgaagatgctccaatagccatcatattt
aaggccatgggtgtggagagcgatcaggagatagtccagatgattggaacagaggaacat
gtcatggctgcttttgcccctagcctggaagaatgccaaaaggctcagattttcacccag
actcaggccctcaagtatattggaaataaagtaaggcggcagcgcatgtggggtggaccc
aagaaaaccaagatggaggaagcccgagagctgctggcctctaccatcctcacccacgtc
ccagtgaaggagtttaacttccgggccaagtgtatttaccttgctgtgatggtgcgcagg
gtgattcttgctcaaggcaacaacaaagtagacgatcgtgattactatggaaacaagcgt
ctagagttggctggccagctgctgtctctgctgtttgaggatctctttaagaagttcaac
tccgagctgaagaagattgcagaccagatcattcctaagcagagagctgcccagtttgac
gtggtgaagcacatgaggcaggaccagatcacgaatggcatggttaatgctatctctact
ggtaactggtctctaaagagattcaagatggacaggcagggtgtgacgcaggtgctgtct
cgcctatcgttcatctctgcgttaggtatgatgaccaggatctcctctcagtttgagaag
accaggaaagtgagtggcccacgctccctacagccctcacagtggggaatgctgtgcccc
tctgacacacctgaaggagaggcatgtgggctggtgaaaaacctggctctaatgacgcac
atcactacagacatggaggatgggcccatcattaagctggcctttaacctcggcgtggag
gacgtcaacctgctgtgtggagaggagctctcctaccccactgttttcctggtcttcctg
aatggtaacatcctgggagtgattcggaaccaccagaagcttgttagcactttcagattg
atgagaagagcaggattcatcaacgagtttgtttcaatctccaccaatgtaacggaccgc
tgcgtctacatctcttctgatggggggcgcctctgcagaccttacatcattgtgaagaac
gggcagccggctgtgaagaacaaacacatcgaggagctttctcagggttacagaaacttt
gaggacttcctgcatgaaagtctggtggagtatcttgatgtgaatgaagagaatgactgc
agcattgctctgtacgagcacatgatcaccaaggacactacacatttggaaattgagccg
ttcactctgctgggggtctgtgctggtttgataccatacccgcatcacaaccagtccccc
agaaacacctaccagtgtgctatgggcaagcaggccatgggcactattggctacaaccag
aggaatcggattgacacactgatgtacctgctagcctatcctcagaggcccatggtgaag
accaagactatcgagctgattgactttgagaagctgcctgctggtcagaatgccacagta
gctgtgatgagctacagcggctatgatattgaggatgctctggtgcttaacaaggcttcc
ctggatagaggttttggtagatgtcttgtgtacaaaaatgccaagtgcaccctgagacgt
tacacaaaccagacctttgacaaagtgatgggtccaatgctggatgctgaaacacgcaaa
cccatttggaggcacagcatcttggatgctgatggaatctgctcccccggtgaacgggtg
gagaataagcaagtgctggtgaacaaatccatgcccacagttacccagacaccactggag
ggcagtacccagccaggccagccacagtacagagatgtacccatcacgtataaaggctca
acagactcctacatagaaaaggtgatgatctcatcaaatgcagaggatgccttcctggta
aagatcctgctcaggcaaacacgtcgtcctgagataggagacaaattcagcagccggcat
ggccagaaaggtgtttgtgggctgattgttcctcaggaggacatgccattctgtgattcc
gggatctgtcctgacatcatcatgaaccctcatggatacccctccagaatgactgttggg
aagctgatagagctcttggcggggaaggcaggtgtactggacggacgttttcactacggt
acagctttcggaggcagtaaggtgaaggacgtgtgtgaggatctcattcgctatggatac
aactaccagggaaaggactatgtcacctctggcatcacaggggagcccctggaagcttac
atctactttggtccagtgtactaccagaaactgaagcacatggttcttgataagatgcat
gctagagcacgtggaccaagagcggtgctcaccagacagcctacagaaggtcgttcccga
gatggtggtctacgtctgggagagatggagagagattgcctgataggatatggggccagt
atgctgctactggagcgtctcatgatctccagcgatgcttttgaagtggatgtgtgtggg
cagtgtggcctgctcggatactctggatggtgccattactgtaagtcctcgtgccatgtg
tcctctttacgcattccctatgcctgcaagctgctcttccaggagcttcagtccatgaac
attataccccgccttaaactgtctcgatacaacgagtaa
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