Astyanax mexicanus (Mexican tetra): 103045043
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Entry
103045043 CDS
T05042
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04620
Toll-like receptor signaling pathway
amex04621
NOD-like receptor signaling pathway
amex04622
RIG-I-like receptor signaling pathway
amex04623
Cytosolic DNA-sensing pathway
amex05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
103045043 (irf7)
04621 NOD-like receptor signaling pathway
103045043 (irf7)
04622 RIG-I-like receptor signaling pathway
103045043 (irf7)
04623 Cytosolic DNA-sensing pathway
103045043 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103045043 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103045043 (irf7)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
103045043 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
103045043
NCBI-ProteinID:
XP_007228105
Ensembl:
ENSAMXG00000016465
UniProt:
A0A8B9K351
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Position
2:complement(64622321..64629954)
Genome browser
AA seq
425 aa
AA seq
DB search
MSHLIERSTEESSSMAKPQFGSWLLEQVQAGRYEGLYMTGTDTFRIPWKHNSRKDCGNED
NRIFREWAVVSGKISDYPNDKAKWKTNFRCALNSLKHFKMVEDHSKDYHDDPHKIYRIVR
PENIHNEEMYKTEDIPMEREDLPFNLDTLHLDYSDYQQWGNYSQPIADQGNYFANPVPEV
ILQPCPQSNIPAPVPALLPPPQQHYAAVPPFENLPFPFELEISIHYRGAEKLKVQSSAQS
VQLHYHCDPSQLSGQSILFPCTEGLTDQIQVEYTKRLLDSIQRGLLLEVCPTGIYGLRQD
KCNVFFSTRDPAEIQNPEPKKLPQNCKELLFSFEKYTKDLMDFQSHQRGSPDYTIYLCFG
EKFPDGKALEKKLIIVKVVPLICRELHKRAQMEGASSLHNDNISLQISYSLFELIESTFL
LPTFD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagccacctgatcgagagaagcaccgaagagagcagcagcatggcgaagcctcagttt
ggttcatggctattagagcaagtgcaggctggaaggtatgagggtctttacatgactggc
acagacactttccgcatcccttggaagcacaactctagaaaagactgcggcaatgaggac
aacagaatatttagagagtgggctgtggttagtggcaaaatctctgattatcccaacgat
aaggccaagtggaagaccaacttccgctgtgctctcaacagcctcaagcactttaagatg
gtggaggatcactccaaagactaccacgatgacccccacaaaatctaccgcatcgttcgc
cctgaaaacatccacaatgaggagatgtacaagacagaagacatcccaatggagcgtgag
gatttgccatttaacctggacactctgcatctcgattattctgattaccagcaatgggga
aactattcgcagcctatagcagatcaaggcaactactttgcaaatcctgtgccggaagtt
attctgcaaccttgtccgcagagtaacattccagctccagtacctgctctactaccacca
ccacaacaacactacgctgcagtgcctccatttgagaacctgccctttccattcgagctg
gagatctccattcactacaggggagccgagaagctgaaggtccagagctcagctcagtct
gttcaactccactaccactgcgatccgtctcagctgagtggccagtccatccttttcccc
tgcactgaaggccttacggaccagatacaggtcgagtacaccaagcgcctcctggacagc
atccagaggggcctgctgctggaggtgtgcccaacaggaatctatggcctccgccaagac
aagtgcaatgtgttttttagcaccagagatcctgccgagattcagaacccagagcccaaa
aagctgccccagaactgcaaggaacttctgtttagcttcgaaaagtacaccaaagatctc
atggatttccaaagccaccagcgtggatcgcctgactacacgatctatttgtgcttcggg
gagaaattccctgatggaaaggccctggagaaaaaactgataatcgtaaaggttgtgcct
ctgatctgccgtgagcttcacaagagagcgcagatggagggagcatcatctctgcataac
gacaacatcagcctgcagatctcctacagcctgttcgaactcattgagtccaccttcctt
ctacccacatttgactga
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