Astyanax mexicanus (Mexican tetra): 103045093
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Entry
103045093 CDS
T05042
Symbol
npas4a
Name
(RefSeq) neuronal PAS domain-containing protein 4A
KO
K26457
neuronal PAS domain-containing protein 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103045093 (npas4a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
103045093 (npas4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
PAS
Motif
Other DBs
NCBI-GeneID:
103045093
NCBI-ProteinID:
XP_007258696
Ensembl:
ENSAMXG00000008132
UniProt:
A0A8B9LDX8
LinkDB
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Position
10:complement(45754259..45760644)
Genome browser
AA seq
926 aa
AA seq
DB search
MYRSTKGASKARRDQINAEIRNLRDLLPISDADKARLSYLHIMSLACMYTRKSVFFCPDV
TEASGAEESQRFLSFHELSELLQAMPGFVLLLTGEGKLLYLSDSVSEHLGHSMVDLVAQG
DSVYDIIDPADHFIMRSNLVPPTSPETDRLFRCRFNTSKSVRRQSAGNKLVLIRARCLSP
PPGPSSPGSYWTSNPVYVCFCAPLDPHPTRPGTSTEQPPASSLEGGFLLPCFRSQHSRDM
RVQEAQDSVMAYLGMDAEALRSRSWYSLLHPQDLTHASAQHCSLLREGGEGRAEMVVRVE
AADNSWVWLYMVLQLETGENPISSNNYIISETEAWSVRQQLTTEETQLSVVLSTSTSTSQ
QDPTSLQSPETLSSPDQVFTPGSSGLSGQSFDFSTTVCSTGSAEEQGASSSMETMALESG
PRSSLSSLEEETFFQQPPGETIDRPSAASSPVTVATVSDLDFLTQNILLPPAFQVDPPLP
ALPLPLPPVPTTQAQQTKEFVCTPPYTPQLGGSSFPFGEPLFSFDPTGATTPPPLAPTAT
VTTTVAPSLSPSAPSNPQGSPPPPTTTLSTLLPLTLQTPSTDILFPAEPCSSSLYEKLPP
TPDSPGDGDCTIMTLPEVRGPLYVDVPHGPLPYPPEGLLTPEASPGKQPTLSFFSLDREK
ERTEISLLAQHISTLAEGFYLDPLLSKLLPSSISPRAPSPSLDSVGLETISLLGEIYPVK
SWRGLDLPIFPDDDSLFEESVLETLLKDLSSPSLSPTPSSPSSPPCSPLTPECWCPPLHF
DGVSAVSAGHFCSVQSAHCNHAAGCGAMMSPLNVGDMTDGKVAGEVAMETEVASSPLSTG
IPASPPLQLTASPVSPVPVSSPVSLASPGLPCAQSLLEELAALEPTFGAGASIAPGLGQQ
PELYQLQSHLPQQCFHKDGSGSDPPF
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgttccactaaaggagcttccaaagctcggagggatcagatcaacgcagagatc
aggaacctgagggacttgttgcccatctccgatgcggacaaggctcgcctctcctatcta
cacatcatgtccctcgcctgcatgtacacgaggaaatccgtcttcttctgtccagatgta
actgaagctagtggagctgaggaaagccagagattcttatcattccacgagctctcagaa
ctgttgcaagccatgccaggttttgtgctgctgctgaccggtgaggggaagctactttac
ctgtcggacagcgtctctgagcacctcggacactcaatggtagatttggtcgcccaaggg
gacagcgtatatgacataatcgacccggcagaccattttattatgagaagtaacctggtg
cctccgacttcacctgagacagatcgattgttccgctgccgattcaacacctccaagtcg
gtacgcagacagagcgctggtaacaagcttgttctgatccgagctcgctgtctgtcacca
ccacctgggccctcctcgccgggatcctactggacctctaatcctgtgtatgtgtgtttc
tgcgcacctctggatcctcacccaacccgacctggcacctccacagaacagcctccggcc
tcgtccctggagggcggcttcctcctaccgtgtttccgctcgcagcacagtcgtgacatg
agagtacaggaagcccaggacagtgtgatggcatacctcgggatggatgcagaagctctg
cgctctcgttcctggtacagcctgttgcacccacaggacctgacgcatgcctcagctcaa
cactgtagtctgttgagagagggaggagaaggcagagctgagatggtggttcgagtagaa
gccgcagataactcctgggtctggctctatatggtcctgcagctggagactggagagaac
cctatcagcagcaacaattatatcatcagtgagacagaggcctggtcagtgaggcaacag
ctgaccactgaggagacacagctctctgtggtgctaagtaccagcactagtacctcacaa
caagatcccacaagtttgcaaagtccggagaccctctccagccccgaccaagtcttcaca
cccggaagcagcggcctctcgggtcaatcgttcgacttcagcacaacagtgtgcagcact
ggctctgcagaagagcaaggtgccagctcctcaatggaaaccatggcattggagagtggt
ccacggtccagtctctcctctctggaggaggagaccttcttccagcagccacctggcgaa
acaatcgacaggccttcagctgcttcatcccctgttactgttgccacagtgtcagacttg
gacttcctcacccagaacatattgcttccacctgctttccaggtagatcccccactacct
gcactcccccttcctctaccaccggtgcctaccacgcaggcacagcaaaccaaggagttt
gtgtgcacacctccatacacacctcagctgggaggcagcagcttcccctttggggaaccc
ctcttcagctttgaccccaccggtgccaccacaccaccaccacttgccccaactgctaca
gtcacgactacagtcgctccttctctttccccatctgcaccctcaaacccacaaggcagc
cctcctcctccaaccaccacactctccaccctcctgccactcactctgcaaactccatcc
acagacattctcttccccgcagagccttgcagcagttcactctatgagaagcttcctccc
accccagacagtccaggagatggggattgcaccatcatgacactgcctgaggttcgtggt
ccactctacgttgatgtccctcacgggccactcccatacccacctgaaggcctgctcaca
cctgaagcctcacctggaaaacagcccaccttgtctttcttctctctagacagagaaaaa
gaacgaacagaaatctcccttttagcgcagcacataagcacactagctgagggcttctac
ctggaccctcttctctccaagcttctgccctcttccatctctcctcgagctccctccccc
tctctggactcagtaggcctggaaacgatctcacttttgggtgaaatctacccggtcaaa
tcctggagaggcctagacttgcccatcttcccagacgacgactctctgtttgaagagagt
gtcttagaaaccctccttaaagacctctcctcaccatcgctctctcccaccccgtcttct
ccctccagtcctccctgttccccactgactcctgagtgctggtgtccacccctgcacttt
gatggggtctctgccgtgagtgccggccacttctgtagcgtccaatcggcgcactgtaac
cacgcggccgggtgcggggctatgatgtcgccgctcaatgtaggcgacatgacggatggg
aaggtggcaggcgaagttgcaatggagacagaggtagcgtcatcgccactgtctaccggt
atcccagcgtcaccaccgctgcaactgacagcctcgcccgtctctccagtgcctgtctcc
tcacccgtcagcctcgcatcgcctggcctgccctgcgcccagtccctcctcgaggagctg
gccgccctggaacccacgtttggggcaggtgcctcgatcgcccctggcctggggcaacaa
cctgagttgtatcaactccaaagtcacctgccgcaacagtgcttccacaaagatgggagt
ggaagtgatcctccgttctaa
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