Astyanax mexicanus (Mexican tetra): 103045104
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Entry
103045104 CDS
T05042
Symbol
rad23aa
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein a
KO
K10839
UV excision repair protein RAD23
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03420
Nucleotide excision repair
amex04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103045104 (rad23aa)
09124 Replication and repair
03420 Nucleotide excision repair
103045104 (rad23aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
amex03051
]
103045104 (rad23aa)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103045104 (rad23aa)
Proteasome [BR:
amex03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
103045104 (rad23aa)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
103045104 (rad23aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
OTU1_UBXL
TBK1_ULD
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
103045104
NCBI-ProteinID:
XP_007260687
Ensembl:
ENSAMXG00000003562
UniProt:
A0A8B9K2H4
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Position
21:complement(32965494..32977535)
Genome browser
AA seq
352 aa
AA seq
DB search
MQITLKTLQQQTIHITIDDHQTVKALKEKIEAEKGRDSFPVSGQKLIYAGKILQDDTPIK
EYKIDEKNFVVVMVSKPKPPAAPEPPKAAPTATPSSSSSSSPPPPPAPAAIPFFSDEDSP
CDPPATVSPTHSPERPCLGEEEEESSSVSGPGYEAMLTEIMSMGYERERVVAALRASYND
PNRAVEYLLNGIPTVPVQETSPVSTRTPGSGTHSTEGENPLEFLRSQPQFQNMRQLVQQN
PSLLPSLLQQLGRENPELLQQIRQHQELFIQMLNAPAGEGEGEGPEGAEHADLGAMGEEG
APVDYIQVTAQEKEAIERLKALGFPEALVVQAYFACEKNENLAANFLLNQDE
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcaccctgaagaccctgcagcagcagaccatccacatcaccatcgacgatcac
cagacggtgaaggctctgaaagagaaaatcgaagcagagaaaggaagggatagttttcca
gtttccggacagaagctgatctatgcgggcaaaatcctgcaggatgacacgcccatcaaa
gagtacaaaatcgacgagaagaactttgtcgtcgtgatggtatcaaagccaaagcctcca
gccgcccctgagccaccaaaggccgctcccacggcaacaccttcctcctcctcctcctcc
tctcctcctcctcctccagctccagcagccataccgttcttctctgacgaggactcgcca
tgtgacccccctgctacagtctccccgacacacagtccagaacgtccttgtctgggtgaa
gaagaggaggaatcgtcttcagtatcgggtccaggctacgaggctatgctaacagagatc
atgtcgatgggctatgagagggagagggtggtggcggcgctgagagccagttataatgac
cctaaccgcgctgtggagtacctgcttaatggtattcctacagttcctgtgcaggagacg
agcccagtgtccacccgcacgcctggctcaggaacacactctactgaaggagagaaccct
ctggagttcttgcgttctcagcctcagttccagaacatgaggcagctggtccagcagaac
ccgtccctcctgccatcactgctacagcaactgggccgggagaaccccgagctcctgcag
caaatccggcagcaccaggagctgttcattcagatgctgaatgccccagctggagaaggt
gagggggaggggcctgagggggcggagcatgctgacctgggggccatgggagaagaagga
gcacctgtggattatatccaggtcacagcgcaggagaaagaggccattgagaggttaaaa
gctctgggcttccccgaggcgctggtggtgcaggcgtacttcgcctgcgagaagaacgag
aacctggccgccaacttcctgctcaatcaggacgaatga
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