Astyanax mexicanus (Mexican tetra): 103045346
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Entry
103045346 CDS
T05042
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103045346 (sox19b)
Transcription factors [BR:
amex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103045346 (sox19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
103045346
NCBI-ProteinID:
XP_007248202
Ensembl:
ENSAMXG00000035936
UniProt:
A0A8B9RGJ9
A0A3B1IU38
LinkDB
All DBs
Position
8:complement(26188586..26192060)
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AA seq
285 aa
AA seq
DB search
MMYSMMEHELKSTGVPQNPHPGAQVLQAGGGCGNASQQQQHAQKNSCPDPMDKVKRPMNA
FMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKEYPD
YKYKPRRKTKPLLKKDAPPGKYPLTTAQGQALSPRMDGYGWAPGGGYTAMQSDALGYTQQ
LHRYDLSGLQYPTHTYMNGANSYSPMSYSSSPQQPSPVMSMVKPEPLPHSPTGASNHHRG
AIQGDLRDMISMYIPGGDVGDPTAQRGYPSVQQHYLGSTVPLTHI
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacagcatgatggagcacgagctgaagagcacgggggtcccgcagaacccccac
cccggcgcgcaggtgctgcaggcaggtggcggctgtggaaacgcgtcccagcagcagcag
catgctcagaagaactcctgccccgaccccatggacaaggtgaagcggcccatgaacgcc
ttcatggtgtggtcccggggccagcggcggaagatggcccaggagaaccccaagatgcac
aactccgagattagcaagcgcctgggcgccgagtggaagctgctgaccgatgccgagaag
cgccccttcatcgacgaggccaagcggctgcgggcggttcacatgaaggagtacccggac
tacaagtacaagccgcgccgcaagaccaagccgctgctgaagaaagacgcgccgccaggc
aagtacccgctcaccaccgcgcagggccaggcgctcagccccaggatggacggctacggg
tgggctcctggaggaggctacaccgccatgcagagcgacgcgctggggtacactcagcag
ctccaccgctacgacctcagcggactgcagtaccccacacacacttacatgaacggagcc
aactcgtacagcccaatgtcctacagcagcagtccccagcagcccagtccagtgatgtcc
atggtcaaaccagagccgttaccccactcccccactggagcctcaaaccaccaccgtggg
gccattcagggcgaccttagggacatgatcagcatgtatatccccggaggagatgtaggg
gaccctacagcccagaggggttaccccagtgtccagcagcactatctgggcagtactgtg
cccctcactcacatctaa
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