Astyanax mexicanus (Mexican tetra): 103045372
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Entry
103045372 CDS
T05042
Symbol
sars1
Name
(RefSeq) serine--tRNA ligase, cytoplasmic
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103045372 (sars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amex01007
]
103045372 (sars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amex03016
]
103045372 (sars1)
Enzymes [BR:
amex01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
103045372 (sars1)
Amino acid related enzymes [BR:
amex01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
103045372 (sars1)
Transfer RNA biogenesis [BR:
amex03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103045372 (sars1)
Prokaryotic type
103045372 (sars1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
YonJ_CC
Motif
Other DBs
NCBI-GeneID:
103045372
NCBI-ProteinID:
XP_007232624
Ensembl:
ENSAMXG00000016507
LinkDB
All DBs
Position
13
Genome browser
AA seq
515 aa
AA seq
DB search
MVLDLDLFRKDKGGDPEIVRETQRKRFKDVALVDNLVQADSEWRKCRFTADNLNKAKNLC
SKAIGEKMKKKEPVGDDETLPDDAQNLEALTAETLSALTVTQIKKVRLLVDEAIQKSDSE
RLKLEAERFEYQREIGNLLHPSVPISNDEDADNKVERTWGDCTAQKKYSHVDLVVMVDGY
EGEKGAIVAGSRGYFLKGPLVFLEQALINYALRILYRKNYNVLYTPFFMRKEVMQEVAQL
SQFDEELYKVIGKGSEKSDDNSVDEKYLIATSEQPIAAFLRDEWLKPEDLPIRYAGLSTC
FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIGTAEEFYQTLGIPYR
IVNIVSGALNHAASKKLDLEAWFPGSQAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKA
EFVHMLNATMCATTRVICAILENFQTDEGVVIPEPLRDFMPPGLTEMIKFVKPAPIDQEQ
SKKQKKQQDGGKKKKKQNAEDSDLQTQVENMSVNS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggacctggacctgtttcggaaggacaagggcggagatccggagatagtgagg
gaaacgcagaggaagcggtttaaagatgtggcgctggtggataacctggttcaggcggat
tcggagtggaggaagtgtcgtttcaccgctgataatctcaacaaggcaaagaacttatgc
agcaaggctattggagagaaaatgaagaagaaggagccagttggtgatgatgagactctt
ccagacgatgcccagaacttggaagctctcacagcagagacgttatcggctctgacagtg
actcagattaagaaggtccggctgttggtggatgaagctattcagaaatcagacagcgag
cggctgaagctggaggcagagcgctttgagtaccagcgggagatcgggaatctcctgcac
ccttcagttcccattagcaatgatgaggacgccgacaataaggtggagcgcacctggggc
gactgcacagcgcagaagaagtactctcatgtggacctggtcgtcatggttgatggatat
gaaggagagaagggggcgattgtcgctgggagccgaggatatttcctgaaggggcctctg
gttttcctggagcaggccttgattaactatgccctgcggatcctctacaggaagaactac
aatgtcctttacacccccttcttcatgcggaaagaggtcatgcaggaggttgcgcagctc
agccagtttgatgaggagttgtataaggtgattgggaaaggtagtgagaagtctgatgac
aactcagtggacgagaagtatttgatcgccacttccgagcagccaatcgcagccttcctg
agagatgagtggctaaagccggaggatctccccatccgctacgctggcctctcgacctgc
ttcagacaggaagtgggttcccatggccgagacactcgcggcattttcagagttcaccag
tttgagaaaattgagcagttcgtgtactcctcccctcatgacaacaaatcatgggagatg
tttgatgagatgatcggaacagcagaggaattttaccaaacactcggaattccctaccgc
atcgtcaacatcgtctccggtgctctgaaccacgcagccagcaagaagctggatctcgag
gcgtggttccctggatcccaggcctttagagagctggtgtcctgctccaactgcacagat
tatcaagctcgccgcctgcgcatccgctacggccagactaaaaaaatgatggacaaggct
gagtttgtacacatgctcaatgcaaccatgtgtgccaccacccgagtaatatgtgccatc
ctggaaaatttccagacagacgagggcgtagtcattccagagccgctcagggactttatg
cctccaggcttaacagaaatgatcaagtttgtgaagcccgctcctattgaccaagagcag
tccaaaaagcagaagaaacagcaggacggagggaagaagaagaagaagcagaacgccgag
gattctgaccttcaaacccaagtagagaacatgtcagtcaactcctag
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