Astyanax mexicanus (Mexican tetra): 103045376
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Entry
103045376 CDS
T05042
Symbol
srsf3a
Name
(RefSeq) serine/arginine-rich splicing factor 3a
KO
K12892
serine/arginine-rich splicing factor 3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
amex05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103045376 (srsf3a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103045376 (srsf3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103045376 (srsf3a)
Spliceosome [BR:
amex03041
]
Common components
Common spliceosomal components
SR proteins
103045376 (srsf3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103045376
NCBI-ProteinID:
XP_007254398
Ensembl:
ENSAMXG00000033364
UniProt:
A0A8B9RJM2
A0A3B1IX24
LinkDB
All DBs
Position
5:16113817..16120002
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AA seq
168 aa
AA seq
DB search
MGDPSLSRDCPIDCKVYVGNLGNSGDKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDH
RDAADAVRELDGRTLCGCRVRVEMSSGEKRSRNRGPPPSWGRRPRDDYRRRGPPPRRRSP
RRRSFSRSRSRSFSRERRRDRSLSRDRNHKPSRSFSRSQSRSRSNDRR
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgggagatccttccctaagtcgagactgcccaatagactgtaaggtttatgtgggtaat
ctaggcaacagtggggataagactgagctggagagggcttttggctattatggccctttg
cgaagtgtgtgggtggctaggaaccctcctggttttgcgtttgtggagttcgaggaccac
agagatgctgcagatgctgtccgggagttggatggaaggaccctttgtggatgtcgtgtg
cgagttgagatgtctagtggagagaaacggtcaaggaatcgtggaccgccaccctcttgg
ggtcgacgcccgagagatgactacaggcgccggggcccaccccctagacgcagatcaccc
aggaggaggagttttagccgcagtcgcagcaggtctttttccagagaaaggagaagggac
aggtctctgtctcgagatagaaatcacaaaccttcaagatctttctcaagatcacaaagt
cgttcccgttctaacgaccggaggtaa
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integrated database retrieval system
