Astyanax mexicanus (Mexican tetra): 103045387
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Entry
103045387 CDS
T05042
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04137
Mitophagy - animal
amex04144
Endocytosis
amex04145
Phagosome
amex04148
Efferocytosis
amex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103045387 (rab5c)
04145 Phagosome
103045387 (rab5c)
04137 Mitophagy - animal
103045387 (rab5c)
04148 Efferocytosis
103045387 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103045387 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103045387 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amex04147
]
103045387 (rab5c)
04031 GTP-binding proteins [BR:
amex04031
]
103045387 (rab5c)
Membrane trafficking [BR:
amex04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
103045387 (rab5c)
Endosome - Lysosome transport
103045387 (rab5c)
Exosome [BR:
amex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103045387 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
103045387 (rab5c)
Exosomal proteins of colorectal cancer cells
103045387 (rab5c)
Exosomal proteins of bladder cancer cells
103045387 (rab5c)
GTP-binding proteins [BR:
amex04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
103045387 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
103045387
NCBI-ProteinID:
XP_007256330
Ensembl:
ENSAMXG00000043717
UniProt:
A0A8B9LBX2
A0A3B1KI46
LinkDB
All DBs
Position
19:complement(26203674..26227223)
Genome browser
AA seq
221 aa
AA seq
DB search
MAGRGGPARTNGATAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKEL
QRQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKNEPQGGAGPGGRARGGVDLQEAAPQGRSGQCCGGGN
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcgaggaggaccagcgcggactaacggcgccaccgccgccggaaacaaaatc
tgccagtttaaactggtgttactcggggagtcagctgtgggcaagtccagcttggtcctg
cgcttcgtcaagggccagttccacgagtaccaggagagcaccattggagctgcattcctc
acacagacagtctgtttggatgacacgacagtaaagtttgagatttgggacacagccgga
caggagcgataccacagtctggccccaatgtactacagaggagctcaggccgccattgta
gtctacgacattactaacacagacactttcactcgagcaaagaactgggtaaaggagcta
cagagacaggccagccccaacattgtcattgctctggctgggaacaaggctgaccttgcc
aacaagagagctgttgattttcaggaagcacaggcgtacgcagatgacaacagcctgctg
ttcatggagacatccgctaagactgccatgaatgtcaacgagatcttcatggccatcgct
aaaaagcttccgaagaacgagccgcagggtggagcaggacctggaggacgagccagaggc
ggagtagacttgcaggaggcggcacctcagggcagatccggccagtgctgtggaggcgga
aactaa
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