Astyanax mexicanus (Mexican tetra): 103045404
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Entry
103045404 CDS
T05042
Symbol
nkx6.1
Name
(RefSeq) homeobox protein Nkx-6.1
KO
K08030
homeobox protein Nkx-6.1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103045404 (nkx6.1)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
103045404 (nkx6.1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
PKK
ABC_trans_N
Motif
Other DBs
NCBI-GeneID:
103045404
NCBI-ProteinID:
XP_007237510
Ensembl:
ENSAMXG00000001095
UniProt:
W5K0K9
A0A8T2L849
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All DBs
Position
17:2618603..2623805
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AA seq
327 aa
AA seq
DB search
MLAVGQMDGSRQSSFLLGPPPLAALHTMTELKAPLYPSYPLPSSSSSSSASPTSASPNPG
GLPASSPGSKTPTGPPSAAQCGIATPHGINDILSRPCVVSTSPSSSSTVPAASSPAGLLS
GLPRFSSLSPPPPHGLYFSPGAAAAAAAAVAVGRYPKPLTELPPRTPIFWPGMVQSPHWR
DARFTCSPHQNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGM
TESQVKVWFQNRRTKWRKRHAAEMASAKKKQDSETERLKGSSENEEDDDDYNKPLDPNSD
DEKITQLLKKHKANPALMLHTADSEGS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgtgggtcagatggacgggtcccgtcagagctccttcctcctcggcccccct
cccctggccgccctgcacaccatgaccgagctgaaggctccactgtacccctcctacccc
ctgccctcttcctcatcctcctcctcagcctcgcccacctcggcctcccccaacccgggc
ggcctccctgcctcctctccgggctctaagaccccaacgggacccccgtcagccgctcag
tgcggaattgccactccgcacgggataaacgacatcctcagccggccctgcgtggtctcc
acgtcgccctcctcctcctccacggtgcccgcagcctcctctccggccggtctgctctcc
ggactgccccgcttcagcagcctgagcccccctccgccccacggcctttacttcagcccc
ggagcggcggcggcggcggcggcagccgtggccgtgggccgctacccgaaacctttgacc
gagctgccccccaggacccccatcttctggcctggtatggtccagagcccgcactggagg
gatgccaggttcacgtgctcaccacatcagaactctgtgctgctggataaagacgggaag
aggaagcatactcgacccacgttttcaggacagcagattttcgctctggaaaagactttt
gaacagaccaagtatttagcgggaccggagcgcgcgcgcctggcctactctttaggaatg
accgaaagccaagtgaaggtctggtttcagaaccgcaggacgaagtggaggaaacggcac
gcggcagaaatggcttcagctaagaagaagcaggactcggagaccgaaaggctgaaggga
tcttcagaaaacgaggaagatgacgacgattataacaaacctttagacccgaactcagat
gacgagaagatcacacagctgctgaagaaacacaaagcgaacccggcgctgatgctccac
acggcggacagcgagggatcgtag
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integrated database retrieval system
