Astyanax mexicanus (Mexican tetra): 103045466
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Entry
103045466 CDS
T05042
Symbol
si:ch73-63e15.2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103045466 (si:ch73-63e15.2)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103045466 (si:ch73-63e15.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Ribosomal_uL24m-like
Motif
Other DBs
NCBI-GeneID:
103045466
NCBI-ProteinID:
XP_007252703
Ensembl:
ENSAMXG00000015881
UniProt:
A0A8B9K1K8
LinkDB
All DBs
Position
16:14523941..14621045
Genome browser
AA seq
1440 aa
AA seq
DB search
MPSLAASSAMDGQNYPHPEGPQLDTGIFGMASSAMENPMQLCTPWSFTQQSYNPYWPVQH
GSQQLHCNGSSEMHMDVFSRSCFSDLDFLTNGDLSQDLSCLDDLSSSTLFSCPPDSLSDH
AVAPGLLPDSLGTVPTIWDINTPAQTQETNSRFQGLNSLEDLSAVISTSSLAGIQRLHAQ
PEEEEEVEEEETEELGHVDTYAEYKPSKSTIGNSHPDRVVETSTLSSVPPPDITYTLSIP
ENIINDRLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVGKGRTVAGIILENYLK
GRKKALWFSVSNDLKYDAERDLQDIGAPNVLVHALNKIKYGDTATSEGVLFATYSALIGE
SQAGGQHRTRLNQILDWCGSDFDGVIIFDECHKAKNATSTKMGKAVLDLQSKLPLARVVY
ASATGASEPKNMIYMSRLGIWGEGTPFKTFDDFLHAVEKRGVGAMEIVAMDMKVSGMYIA
RQLSFSGVSFRIVEIGLDDDFKVVYNKAAKLWAEALVVFTQAADLLGMVSTKSLWGQFWS
SHQRFFKYLCIAAKVRRLVELANRELEAGKCVVIGLQSTGEARTREVLDENDGHLDKFVS
AAEGVFQSLVQKHFPSEKERREKGPGTKRKRKPRGRNPKYPKQTADGRVVINISEDSSTE
SETVDSDSNSSPDSLQDNSDDVIFVTHTNCHAAQLEEKKQGLLNKISELGKELPLNTLDE
LIDKFGGPERVAEMTGRKGRVVRQPDGSVRYESRAEQGHTIDHINIKEKDRFMNGDKLVA
IISEAASSGISLQADRRVNNQCRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYIFLI
SELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTKALDKITKAILGQ
IESKVPPPKEYPGGDAMFFRDMKQGMMDVGIFCKEPRFGINTEKDCSITKFLNRILGLEV
HKQNSLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDEIYNETQDMFLTPGNPQEGQV
ILYKISVDRGMPWEEALNKSQTLSNPDDGFYLSHKVRGSHPCVLLAEQGRGHNLVVYKPN
VGKQKQTENLENIQKKYRKVTAEEAKESWESQYKFSFKKCSHAVWTGRCKKVDEGQECLQ
GMRLRQYHVLCGALLCVWKRVADVVADVTSSSILQIVRLKTREHKRVGIKIPENCMSPVR
EELSKMDKEVKRKRQEKLLQAQEQRAAEQRRSLLEDRQRELTEFFLQPSHLSSLGSHYPT
PVTFPSFTLPSFPSQPSLRNPIEGLLDLRVRSPSPLSPDSTQAGLGAVEDFELEAFTQGL
QQQPQQDNHEDIIAFLNSFLSTQQPSTAATQQAPTSLLPPSTISYPSSSSSSLFSPSLTP
SSSSSSLSLFASVSSSDQQNLPLPSANGSSDTVINAREVLNSMLCGSDARQSVIQFGLPE
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgccttccctcgctgcttcatctgccatggatgggcagaactatccacatccagaggga
ccacagctggatactggaattttcggaatggcctcatcggctatggagaatccgatgcag
ttgtgcacgccgtggagtttcacacagcagtcttacaacccttactggccggtgcaacat
gggagccagcagctccattgcaacggttcttctgaaatgcacatggatgttttcagccgt
tcctgtttttctgatctggacttcctgaccaatggagacctctctcaggacctctcctgt
ttagatgatctgtccagctccacactcttctcctgtcctcccgattccctgtctgatcat
gcggttgcaccggggctgctgcccgacagcctgggaacagttccgaccatatgggacatc
aatacaccagcacagacccaggagaccaattccaggtttcagggtttgaacagtttagag
gatctctctgctgtgatcagcacttcgtctctggcaggcattcagagacttcacgcacag
ccggaggaggaagaagaggttgaggaagaggaaacagaggagctgggccatgtggacacc
tacgctgaatataaaccatcaaaatctaccataggcaattcccaccctgaccgagttgtg
gagaccagcactctgtccagcgttcctcctcctgacatcacttacacactctccattcct
gaaaacatcatcaacgataggctgctctctgctctgcagctagaggctatcatctacgcc
tgccagcaacacgaggtgattctgcagaacaaccagagagcaggcttcctcataggcgat
ggagcaggagtgggtaaaggccgcacggtggccggcatcattctggagaactacctaaag
ggaaggaagaaagctctgtggttcagtgtctccaatgacctcaaatatgatgcagaaaga
gatcttcaggacatcggtgctcccaatgttcttgtacatgccttgaataaaattaagtat
ggagatacagctacctcagaaggggtcctgtttgcaacctactcagctcttattggagag
agccaggcagggggccagcaccgcaccagactcaaccagatcctggactggtgtgggtct
gactttgatggagttattatatttgacgaatgccacaaagccaagaatgccacgtccacc
aaaatgggcaaggctgtgctggacctgcagagcaagctgcctctggccagggttgtgtat
gccagtgccacaggtgcctctgagccaaagaacatgatctacatgagccgtctggggatc
tggggtgaagggacgccgtttaagacattcgatgacttcctccatgctgtcgagaagaga
ggtgtgggggccatggagattgtcgccatggacatgaaggtcagcggaatgtacattgcg
cggcagctgagcttctcaggggtctccttccgtatcgtagagatcggcttggatgacgac
ttcaaagtcgtctacaacaaagctgccaaactgtgggccgaggccttggtggtcttcact
caggctgctgatctgctgggtatggtgtccacgaagtctctgtggggtcagttctggtcg
tcccaccagcgctttttcaaatacctctgcatcgctgccaaggtgcgccgtctggtggag
ctggccaatagggagctggaggctggcaagtgtgtggtgattgggctgcagtctacaggg
gaagctcgaacccgggaggttcttgatgagaacgatgggcatctagataaattcgtctct
gctgcagagggtgtattccagtctctagtccagaagcacttcccttcagagaaagagaga
agagaaaagggaccaggaaccaagagaaaacgaaagccccggggcaggaacccaaagtat
ccaaagcagaccgcagatgggagagtggtcattaacatcagcgaagacagcagcacagag
tctgagacagtggacagcgactccaactcctctcctgattcgctccaggacaacagcgat
gatgtcatcttcgttacccacaccaactgtcatgctgctcaactagaagagaaaaagcag
ggtcttctgaacaaaatctctgagcttggaaaagaactacctctaaacacactggatgag
cttatagataagttcggaggtccggagagagtagctgagatgacaggccgtaaggggcgg
gtggtccggcagccagacggtagtgtacggtatgaatctcgagctgagcagggccacact
atcgaccacatcaacatcaaggagaaggatcgctttatgaacggagacaagttggtggct
atcatctctgaagcagccagttcagggatttctctgcaggcagacagacgggtgaataac
cagtgcagacgggttcatatgactctggagctgccctggagtgctgaccgtgccattcag
caattcggtcgcactcatcgctccaaccaggtcacagccccagagtacatcttcctgatc
tcagaactggccggcgagaggagattcgcttctattgtagctaaaagactggagagcttg
ggagctttgacccacggcgaccggagagccacagaatctcgagacttgagcaagtacaac
tttgaaaataaatacggtaccaaagctctagataagatcaccaaagccatcctgggacag
attgagagcaaggtgcctccacccaaagagtatcctggaggtgacgccatgttcttcaga
gatatgaagcaaggcatgatggatgttggaatcttctgcaaagagcctcgtttcggcatt
aacactgaaaaagattgctccatcactaagttcctcaaccgtatcctgggtctggaggtg
cacaaacagaactcacttttccagtacttcactgacaacttcgactacctaatcgaaaag
gacaagaaggaaggcaaatatgacatgggaattctggatctggctcctggtaatgatgag
atttacaatgagactcaggacatgtttctgactccaggcaaccctcaggaaggccaggtt
attctctataagatcagcgtggacagaggcatgccatgggaagaggccctgaataaatcc
caaactctcagtaacccagacgacggattctacctctcccacaaggtcagaggaagtcat
ccgtgtgtgctgctggctgagcaaggccggggacacaacctggtggtctacaagcccaac
gtaggcaaacagaaacaaacggagaacctggagaacatccagaagaagtaccgcaaggtg
actgcagaggaagcgaaggagagctgggagagtcagtataaattctcctttaagaaatgc
agtcacgctgtctggaccgggcggtgtaagaaggtggatgagggtcaggagtgtttgcag
ggcatgcggctgaggcagtaccacgttctgtgtggagctctgctgtgtgtgtggaagcgg
gtggctgacgtggtggctgacgttaccagctccagcatcctgcagatcgtccgcctcaaa
accagagaacacaagagagtgggtataaagatcccggaaaactgtatgtctccggtgaga
gaggagctaagcaagatggataaggaggtgaagaggaagcggcaggagaagctgcttcag
gcgcaggagcagcgagcggccgagcagaggcggagtttgctggaggacaggcaaagggag
ttaacagaatttttcttgcagccttcgcatttatccagcctggggtcacattacccgacc
cctgtaacattcccctccttcaccctgccctccttcccttcacaaccttcactaaggaac
cctatagaaggccttctggacctgagggtgcgcagcccctcgcctctatccccggacagt
acgcaggctggcctcggagccgtggaggactttgagctggaggcctttacacagggactg
cagcagcaaccgcagcaggacaatcacgaggacatcattgcgttcctcaactccttcctc
agcacacaacaaccctcaaccgcagccactcaacaagccccaacaagccttctccctccc
tccaccatctcttatccatcctcctcatcctcgtctctcttctccccctcactcacaccg
tcctcctcttcctcctctctgtcgctgttcgcctccgtctcgtcatcagaccagcagaac
ctccctctgcccagcgccaacggctccagcgacacagtcatcaacgccagagaggtgctg
aacagtatgctgtgcggctcggacgctcgccagtccgtcattcagttcggactgccagag
tga
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