Astyanax mexicanus (Mexican tetra): 103045539
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Entry
103045539 CDS
T05042
Symbol
apba1a
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1 isoform X1
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103045539 (apba1a)
Membrane trafficking [BR:
amex04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
103045539 (apba1a)
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
103045539 (apba1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
PRT6_C
Motif
Other DBs
NCBI-GeneID:
103045539
NCBI-ProteinID:
XP_049326234
Ensembl:
ENSAMXG00000008572
LinkDB
All DBs
Position
22:complement(24091527..24138200)
Genome browser
AA seq
960 aa
AA seq
DB search
MSHQEAPLGQDLSEAAEADLERRGPEGQQPPSHRRRHDNSGRSRNHHNGHGGENSHGQSG
SQRYRRYEGSEGGGRQRTSRRTPEEGEAEQQRTQQPIPRPAVTRYRRQGDAEARLRAQQQ
RQRQRERQQREAERAEQQRLEQLEQQQQQPGEPEEDEEDGSALARSASTESGFHNHTDRA
EGDVVMASEAEPEDETTYGVPLRPEAEEYTESAESEQQPAGPAHAQPQYPPQPPPLPREP
LPNTERPPRHDAEALNPNYSNYVYTQPLYRSPGREGQAQGEDEPYSEPYADYAVQEHVYE
EIPEAPGTQAEGQTPQQRQRPGFRLFERDSYRQQEAVGSRLHHYDERSDGESDSPEKEAE
FAPYPRADSCEQDEDIDQIVAEVKESLSSHSLERAAAGSGREEEEEDEWPESEHRIKAET
EDNKLQESPGEEGKGEEGRTPVSSPSEDPALAKNSRQKRDAISLAIKDIKEAIEEVKTRT
VRSPYTPDEPKEPIWVMRQDLSPTVESDLQPSLGGDSPGSGSTSPQGAESSSQQLPLQEG
SDSLESPSPASKESRRSLASFPTYVEVPGPCDPEDLIDGIIFAANYLGSTQLLSDKTPSK
NVRMMQAQEAVSRIKQTAQKLAKNRKKQAPEGEAQPMTEVDLFISTQRIKVLNADSQETM
MDHPLRTISYIADIGNIVVLMARRRMPRSDSQENMEASDPAQDEKRQYKMICHVFESEDA
QLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDLLNTQDMYNDDLIHFSKSENCKDV
YIEKQKGEILGVVIVESGWGSILPTVIIANMMHAGPAEKSGRLNIGDQIMSINGTSLVGL
PLSTCQSIIKGLKNQSRIKLNIVRCPPVTTVLIRRPDLRYQLGFSVQNGIICSLMRGGIA
ERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPAAMYRLLTAQEQPVYI
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgagccatcaggaggcgccactgggccaggatctgagtgaggctgccgaggctgacctg
gagcggcggggccccgagggccagcagccaccgtcccaccgcagacggcacgacaactcg
ggccggtcccgcaaccaccacaatgggcatggtggagaaaactcccatggccagtctgga
tcccagcgctaccgcaggtacgagggctcggaggggggcggacggcaacgcacctcccgc
agaactcctgaagagggtgaagcggaacagcagcgcacacagcagccaataccacggcct
gcagtaacacgctaccgccggcagggtgacgcagaggcacggctgcgggcacagcaacag
agacagaggcagagagagaggcagcagagggaggcagagagggcggagcaacagaggcta
gagcagctggagcagcagcagcaacagcctggagagcctgaggaggatgaggaggatggc
agcgctttggcccgctctgccagcactgagagtggtttccacaatcacacagaccgggct
gagggtgacgtagtcatggcctcagaggcggagcctgaggatgagaccacttatggagtc
ccactgcgacctgaggctgaggagtatactgaaagcgcagagtcagagcagcagcctgca
ggaccagcccatgcacagccacagtatccccctcaaccaccaccgctgccccgtgaacca
ttgccaaacacagagcggcccccaaggcacgatgccgaggctctcaaccccaactactct
aattatgtttacacacagccgctgtaccgcagcccaggccgtgagggccaagcccaaggt
gaagacgagccctattctgagccttatgctgactacgccgtccaggagcatgtgtatgag
gagatcccagaagcccctggaacacaggctgagggacagaccccccaacagcggcagagg
cctggcttccggctatttgagcgcgattcatacaggcaacaggaagccgtgggctccagg
ttacaccactacgacgagcgatctgacggagagtcagacagcccagagaaggaggcagaa
tttgctccgtacccacgtgccgacagctgcgagcaggatgaggacattgaccagattgtg
gcagaggtgaaggagagcctgagctctcatagcttggagcgtgcagcggcaggctcaggc
agggaagaggaagaagaggacgagtggcctgaatctgaacaccgcattaaagcagagaca
gaggacaacaagctccaagagtccccaggtgaggaagggaaaggagaggagggtaggacc
cctgtaagcagcccttccgaagatccagctttagcaaagaacagccggcagaagagggat
gccatctctttggctatcaaggacatcaaggaggctattgaggaggtgaagaccagaaca
gtgcgctcaccgtatacacctgatgagcccaaagaacccatctgggtgatgaggcaggac
ctaagccccactgtggagtcagacctacagccatcactagggggagattccccggggtca
ggctccacctctccacagggggcggagtcttccagccaacaactgccactgcaggagggg
agtgacagcttggagtccccgtcacctgccagtaaagagtcaaggaggagtcttgcctca
ttcccaacatatgtggaagttccaggtccttgtgacccagaggaccttatcgatggcatc
atcttcgctgctaactacttgggttctacacagcttctctcagacaagacaccctcaaaa
aatgtgcgcatgatgcaagcccaggaggcggtcagtcgcataaagcagacggcccagaaa
ttagccaaaaacaggaagaagcaggcccctgaaggtgaagctcaacccatgactgaggtg
gacctctttatttccactcagagaataaaagtgctgaatgcagactcccaggaaaccatg
atggaccaccccttgaggaccatctcgtacattgcagacatcgggaacatagtggtactg
atggctaggcggagaatgcctcgctccgactctcaggagaatatggaggcgtctgaccca
gcacaggatgagaagcggcagtacaagatgatctgtcacgtgtttgagtctgaagatgcc
cagctcatagcacagtccattggccaggctttcagtgtagcataccaagaattcctgcgt
gccaatggcataaaccctgaagacctgagccagaaagagtacagtgacctccttaacacg
caggacatgtacaacgatgacctcatacacttctccaagtctgagaactgtaaagatgtt
tacattgagaagcagaagggtgagatcttaggtgtggtgattgtagagtcaggctggggc
tctatccttcccacagttattattgctaatatgatgcatgctggacctgcggaaaaatca
ggaagactgaatattggagatcagattatgtctatcaacggcaccagcctcgttgggctc
cctctctccacttgtcaaagcatcattaaggggctgaagaaccagtccagaatcaagctg
aacattgtaaggtgcccaccagtcaccaccgttctcatcagaagaccagacctaagatac
cagctgggcttcagtgtgcaaaatggcattatttgcagccttatgagagggggaatagct
gaacgaggtggggtccgcgtgggtcaccgcatcattgagatcaatggccagagtgtggtg
gccactcctcatgagaagattgtacacatcctgtcaaatgcagttggcgagattcacatg
aagactatgcctgctgccatgtaccgcttgttgacagcccaggagcaaccagtttacatt
taa
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