Astyanax mexicanus (Mexican tetra): 103045548
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Entry
103045548 CDS
T05042
Symbol
six1a
Name
(RefSeq) homeobox protein six1a
KO
K15614
homeobox protein SIX1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103045548 (six1a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
103045548 (six1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
Homez
YdaS_toxin
HTH_26
Motif
Other DBs
NCBI-GeneID:
103045548
NCBI-ProteinID:
XP_007247681
Ensembl:
ENSAMXG00000021318
UniProt:
A0A8B9R888
LinkDB
All DBs
Position
7:9705860..9712521
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AA seq
277 aa
AA seq
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MSISSSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACEHLHKNESVLKAKAMVAFHR
GNFRELYKILEGHQFSTHNHGKLQQLWLRAHYAEAERLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAQATGLSTTQVSNWFKNRRQRDR
AAEAKERESRPRRLSPLDGEGKSLMSSSEEDFSPPPSPRHTHPHTHTPHPTALSFLRGDG
IHPAACLGVLQQQQGHPVQLQDSLLGPLASSLAELSS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtccatctcctcgtccttcggcttcacgcaggagcaggtggcgtgtgtgtgcgaggtc
ctgcagcagggtggtaacctggagcgcctgggccgcttcctgtggtccctcccggcctgc
gagcacctccacaagaacgagtcggtgctgaaggccaaggccatggtggcgttccaccgg
ggaaacttccgggagctctacaagatcctggagggccaccagttctccacacacaaccac
ggcaagctgcagcagctgtggctgcgggcgcactacgccgaggcggagaggctgcggggc
cggccactgggcgccgtggggaagtaccgcgtccgccggaagttccccctgcccaggacc
atctgggacggcgaggagaccagctactgcttcaaggagaagtccaggagtgtgctgagg
gactggtacacccacaacccgtacccctcgccccgggagaagagggagctggcacaggcc
actggcctcagcaccacacaggtcagcaactggttcaaaaacaggaggcagagggaccgg
gcggccgaggccaaggagagggagagcagaccgaggcgcctctctccgctggatggagaa
gggaagtccctgatgtccagctcagaggaggacttctccccgccgccgagcccacggcac
acacaccctcacacacacactccccatcccaccgctctcagcttcctccggggggacggc
attcaccctgcggcctgcctcggggtcctgcagcagcagcagggtcatcctgtccagctc
caggactctttactcggacctctggcgtccagcctggcggagctgagctcctag
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