Astyanax mexicanus (Mexican tetra): 103045557
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Entry
103045557 CDS
T05042
Symbol
lrit2
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103045557 (lrit2)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
103045557 (lrit2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
Ig_3
LRR_4
I-set
ig
LRR_5
Ig_2
Ig_VEGFR-1-like_5th
V-set
fn3
Fn3_ROS1
FN3_DSCAM-DSCAML_C
LRR_EndoS
LRR_14
KdpD
Motif
Other DBs
NCBI-GeneID:
103045557
NCBI-ProteinID:
XP_007249549
Ensembl:
ENSAMXG00000039220
LinkDB
All DBs
Position
7:complement(34352323..34361046)
Genome browser
AA seq
563 aa
AA seq
DB search
MDTICNVLGLGLLLLSVKQINSNDVQCLAGCSCTTSRQGRSLLCMETPLSRIPEDIPEDF
TKIRIEKSHLTEIPKSAFSRYKSLENLWLNFNDITIINIKSLEGLNNLTELRLEGNKLSS
VPWTAFEDAPSLKILDLKHNRLDVLPEHALKFLPGLTYLDLSFNQLTVISKDVFLKWPLY
DRVFKSAERETVPTNVVLALHENPWQCDCRLRGFVEFVMSLSPPIILMNSYLSCSGPEYM
AGKFFHEVELKTCIKPVATSPTTNISMPLGANVTLTCFAMARPEPAVWWTYGLKILRGFH
ELQTRVNEETVKSELIIPSLHLADRGVYTCTANNFIGNSSVSILVDVKSLDQSNPRSPAY
PATAPEENVYIDIRIAKQTVYGITIEWYAVTENPSETWFSIHFGRYDTPKKELIYIGPGI
NTYSVTDLLPATKYDICVTLKNQAPRNGQCIVFVTGSDMSEMEQREKLIHIVVIVLAMVL
AVPAGMYACTTDTKFHCFDRGLETWRNWRRAEQTHRPDEGQGTFDSLQGASDEGLCKDSN
EGHNTRRRSEDKIQKNKPSTQLY
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggataccatttgtaatgttcttggtttgggattgttgcttctctctgtaaaacagatc
aactcaaatgatgtacagtgtttggctggatgtagctgcacgaccagtcgccaaggaagg
tctctcttgtgcatggaaacacctttatcgaggatacctgaagatatacctgaggatttc
actaaaatccggattgagaaatctcacctgactgaaattcctaagagtgcattctctcgt
tataaatcactggagaatctctggctaaactttaacgatatcactataattaatataaag
agtctagaggggttaaataatctgactgagctcaggctggaggggaataaactgagctcg
gttccatggacagcatttgaggacgcacccagcctgaagatcctggacctgaagcacaac
cgcctggatgttctgcctgaacacgcactgaaatttctgccaggtctgacctacttagac
ttatccttcaatcagcttacagtcatttctaaagacgtgttcctgaagtggcctctgtac
gaccgtgtttttaagagtgcagagcgggaaactgtgccaaccaacgtggttctggctctt
cacgagaacccctggcagtgcgactgccgcctcagagggtttgtggagtttgtgatgtca
ctaagcccacccatcatcctgatgaactcctacctaagctgcagtggccccgagtacatg
gcgggaaaattcttccacgaggtcgagctaaagacttgcatcaaacccgtagcgactagt
ccgaccaccaacattagcatgccactaggggcaaacgtcaccctgacgtgcttcgcaatg
gccagaccagaaccagctgtctggtggacatatggtcttaagatactaagaggatttcat
gaacttcagacccgtgtgaatgaagagacagtcaagtctgagctgattattccatccctg
cacttagctgatcgtggagtgtacacctgcacagccaacaacttcatcggcaattcatct
gtcagcattctggtggacgttaaatctcttgaccagtcaaatccccgttccccagcatat
cctgctacagcacctgaggagaatgtttacattgatatccggattgccaagcagacggta
tacggcatcactattgagtggtatgctgtgacagaaaacccatcagagacctggttcagc
atccacttcggcagatacgacacacccaaaaaggagctgatctatattggccctggtatc
aacacctactcagttacagacctgctgccggccactaagtatgacatctgtgtcactcta
aagaaccaagccccccgtaacggtcagtgcattgtgtttgtgacgggcagcgacatgagc
gagatggagcagagagagaagctcattcatatcgtggtcattgtgttagctatggtgctg
gctgtgcctgcaggaatgtatgcctgcactacagacactaagttccattgcttcgatcgt
ggattggagacgtggaggaactggaggcgggcagagcaaacgcacaggccggatgagggg
caggggacctttgatagcctccagggtgccagcgatgaaggcctctgcaaagattccaac
gagggacacaacactcgcagaagatctgaagataaaatccagaaaaacaaaccctcaaca
cagctgtactga
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