Astyanax mexicanus (Mexican tetra): 103045580
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Entry
103045580 CDS
T05042
Name
(RefSeq) homeobox protein TGIF2
KO
K19553
homeobox protein TGIF2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
103045580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103045580
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
103045580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
103045580
NCBI-ProteinID:
XP_007253364
Ensembl:
ENSAMXG00000015969
UniProt:
W5L9C2
A0A8B9LJS4
LinkDB
All DBs
Position
5:complement(14026596..14037137)
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AA seq
408 aa
AA seq
DB search
MKSVKRVFEEEHGGETEFSAMSDSDPCEDDGYPLNLSTSAGGAGGSAKRRRRGNLPKESV
QILRSWLYEHRLNAYPSEQEKLSLSGQTNLSISQICNWFINARRRLLPDLLRKDGKDPTQ
FTISRRAGKMDSRPTESSSPDHSTPLSVSAPRPSVIRPAPMLDLSMLGNTATAILAGAGC
LVGSSAASRDGVMALMQMDTQGLIKREGLASSPNPSFTTIPVSSSGSSSLGTTSPTGVLF
NTPPPTPPELCPHDFSDLKLLVDAALQRAAEQESQRQKEQQQPQSVTPTTALSGSEAQNR
DVEPERSSKSLVPVPSNQSDSALSLEEKAVLPVSVPVLKASAVAPPAGGSIVNLPLVPQR
VPGAVSFQTNGVWSVVHGPVRPASPTPSSVTHTWSSQHTLRAVRETVN
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgttaaaagagtctttgaagaggagcatggtggagagaccgagttttccgcc
atgtcggacagtgacccctgcgaggacgatggttacccgctcaatctttccaccagtgca
ggaggagcagggggctctgccaaacgccgccgtcgagggaacctacctaaggagtctgtt
cagattctaaggagttggttgtatgagcatcgcctcaatgcctatccctctgaacaggag
aagctcagcctatcagggcagacgaatctgtctatctcacagatctgcaactggttcatc
aatgccaggcgacggttgcttcctgacctgctcagaaaagatgggaaagacccaactcag
ttcactatttcacgccgtgctggaaaaatggacagtcgacctactgaatcttcctctcca
gaccactctactccactttctgtatctgcacctcgcccctctgtcatccggcccgcccca
atgcttgacctgagcatgcttggtaatacagcaacagccattttagcaggtgctggctgc
ctggtgggatccagtgcagcaagtcgagatggagttatggctctcatgcagatggacact
cagggcttgataaaacgagaaggtttagcttcctcccctaaccccagcttcactacaatt
ccagtctcctcctctggcagctcaagcctgggtacgacgagtcctacaggtgtactgttt
aacacgccaccccctaccccaccagagctctgcccccatgatttcagtgacctgaagctg
ttggtggacgcggcgttgcaaagagcagccgagcaggaaagtcagagacagaaggagcaa
cagcaaccgcagtcagtaaccccaactactgctctttctggatcagaagctcagaaccga
gatgtagagccagaaaggagcagcaaaagcttagttcctgtccccagcaaccagtcggac
tctgctctgagcctagaggagaaggctgttctcccggtgtctgtgccagtgttaaaggcc
tcagctgtagctccccctgctggaggatccattgttaacttgccactggtgccccagagg
gtccctggagctgtgagtttccagacaaacggtgtgtggagcgtggtccacggcccagtc
cgaccagccagtccgaccccaagcagtgtcacgcacacctggagctcacaacacacactc
cgtgcagtcagggaaactgtcaactga
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