Astyanax mexicanus (Mexican tetra): 103045582
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Entry
103045582 CDS
T05042
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103045582 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103045582 (exosc2)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103045582 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
103045582 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
103045582
NCBI-ProteinID:
XP_007254053
Ensembl:
ENSAMXG00000042605
UniProt:
A0A8B9H8W0
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Position
1:complement(20985573..20990646)
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AA seq
295 aa
AA seq
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MAVDMRLPTARKLISLPGSLSNAEGKHLVVPGDVITSDTGFMRGHGTYMDDEKLTASVAG
EVERVNKLICVKPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGG
ELRRRSAEDELTMRDYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQVSPSL
VKRQKTHFHNLPCGASIILGNNGFLWLYPTPGHQDEEAGGYYTSLEPVALSDREVISRLR
NCLLALAAHKVLLYDTSVLYCYESSLSHQIKDILKPETMDEIVMETRQRLLDQEG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggatatgagattacccactgcccgaaaactcatctccctgcccggctctctg
tctaacgctgagggtaaacacctggtggtcccgggagatgtgatcacatctgatacaggg
tttatgaggggtcatggaacctacatggatgatgagaagctcacagcctcagtggctggg
gaggttgaacgtgtcaacaagctgatctgtgtgaagccactgaagacacggttcaatggt
gaagttggtgatgtggtggttggcaggataacagaggttcagcagaaacgttggaaagtg
gagaccaactctcggttggactctgtattgcttctgtcctcagtaaatcttccaggagga
gagttgaggaggcgatcagcagaagatgagctcaccatgagagattatcttcaagaaggg
gacctcatcagtgcagaggtacagtccgtcttttcagatggagctctttcgcttcacacc
cgcagcttgaagtatggcaagttgggacagggtgtactggtgcaagtatcaccatctctt
gtgaagagacagaaaacccatttccacaatctgccctgtggagcttccataatcctgggg
aacaatggcttcctttggctgtaccctacaccagggcatcaagatgaagaggcaggagga
tactacacaagcctggagcctgttgctctatcagatcgcgaggtcatttcgagactgagg
aactgtttgctggccctggcagctcacaaagtgcttctgtatgataccagcgttctctat
tgctatgaatcctccctctcccatcagatcaaggatatcttgaaaccagagactatggat
gaaattgtgatggagacacgacagcgacttcttgatcaggagggttaa
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integrated database retrieval system