KEGG   Astyanax mexicanus (Mexican tetra): 103045582
Entry
103045582         CDS       T05042                                 
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103045582 (exosc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amex03019]
    103045582 (exosc2)
Messenger RNA biogenesis [BR:amex03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     103045582 (exosc2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     103045582 (exosc2)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2 EXOSC1 RRP40_S1
Other DBs
NCBI-GeneID: 103045582
NCBI-ProteinID: XP_007254053
Ensembl: ENSAMXG00000042605
UniProt: A0A8B9H8W0
LinkDB
Position
1:complement(20985573..20990646)
AA seq 295 aa
MAVDMRLPTARKLISLPGSLSNAEGKHLVVPGDVITSDTGFMRGHGTYMDDEKLTASVAG
EVERVNKLICVKPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGG
ELRRRSAEDELTMRDYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQVSPSL
VKRQKTHFHNLPCGASIILGNNGFLWLYPTPGHQDEEAGGYYTSLEPVALSDREVISRLR
NCLLALAAHKVLLYDTSVLYCYESSLSHQIKDILKPETMDEIVMETRQRLLDQEG
NT seq 888 nt   +upstreamnt  +downstreamnt
atggctgtggatatgagattacccactgcccgaaaactcatctccctgcccggctctctg
tctaacgctgagggtaaacacctggtggtcccgggagatgtgatcacatctgatacaggg
tttatgaggggtcatggaacctacatggatgatgagaagctcacagcctcagtggctggg
gaggttgaacgtgtcaacaagctgatctgtgtgaagccactgaagacacggttcaatggt
gaagttggtgatgtggtggttggcaggataacagaggttcagcagaaacgttggaaagtg
gagaccaactctcggttggactctgtattgcttctgtcctcagtaaatcttccaggagga
gagttgaggaggcgatcagcagaagatgagctcaccatgagagattatcttcaagaaggg
gacctcatcagtgcagaggtacagtccgtcttttcagatggagctctttcgcttcacacc
cgcagcttgaagtatggcaagttgggacagggtgtactggtgcaagtatcaccatctctt
gtgaagagacagaaaacccatttccacaatctgccctgtggagcttccataatcctgggg
aacaatggcttcctttggctgtaccctacaccagggcatcaagatgaagaggcaggagga
tactacacaagcctggagcctgttgctctatcagatcgcgaggtcatttcgagactgagg
aactgtttgctggccctggcagctcacaaagtgcttctgtatgataccagcgttctctat
tgctatgaatcctccctctcccatcagatcaaggatatcttgaaaccagagactatggat
gaaattgtgatggagacacgacagcgacttcttgatcaggagggttaa

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