KEGG   Astyanax mexicanus (Mexican tetra): 103045606
Entry
103045606         CDS       T05042                                 
Symbol
nedd1
Name
(RefSeq) protein NEDD1
  KO
K16547  protein NEDD1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amex03036]
    103045606 (nedd1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:amex04812]
    103045606 (nedd1)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     103045606 (nedd1)
   Microtubules and associated factors
    gamma-tubulin ring complex
     103045606 (nedd1)
Cytoskeleton proteins [BR:amex04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     103045606 (nedd1)
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40 WD40_WDHD1_1st WDR55 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st EIF3I Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st eIF2A NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_SPT8 PEP5_VPS11_N WD40_like Beta-prop_Vps41 Beta-prop_LRRK2 Beta-prop_DCAF12 Beta-prop_VPS8 SdiA-regulated KNTC1_N Frtz Big_2 Mto2_bdg
Other DBs
NCBI-GeneID: 103045606
NCBI-ProteinID: XP_007238149
Ensembl: ENSAMXG00000009459
UniProt: A0A8B9HNV5
LinkDB
Position
10:complement(36557497..36564896)
AA seq 672 aa
MEELTRLVSSGDCLKIWDSASMTVVEQFNPHSATHPLAQVCWSSSNQYIVSASSIGDKLV
VTSLKSSPVPVMELAEGKKQTRVALNSTSQFLVSGGLDNTVNIWDLKTKRLHRSLKDHKE
EVTCVSFNGGDSYIASGSTSGDIILHSITTNLSSKPFGHGPNEPVHDLKYSLIKRSLLGS
VSDSGSVVLWDANTQKEVHTFEGAHKAPASGLSFSPANDLLFITVGLDKKIVCYDTASKI
IFRSKQVESPLTAVDFTPDGAGLVVGSTQGRIYMYDLRNLSAPIKTTTAHKTSVTCIRFQ
HSNTRLKTSKTVSSKVSSTQSKRISVKLGQNQQSGPPTPTSTVPSSMPVLENLSENLGNT
GDVSSKEAEGQHSLDKFSSVGRNSLSLDVFSPVADGLKTHGFSGDTPTSRNGGSSSADLF
FREAEGQHGSDKFKVGRNSLDIFSPVRDDYKSYRMSDASSGKKDLDFLPQYHGSAQRKNP
LGTPGSRCYSPLSAVQTPPAIKEEEPVTTMPPHTDAQNSVMMEKTNGPRTDVMTTPPASQ
TAHIQQSVPPFNTPEPSQRREVPTQLTYDSPVNSSQPVPAAEAAAASAAGSGGAPLTSVQ
MNFVRNMIHEALEDFRDTCHRDIINLQVEMVRQFYIQLNEIHGLIERYSVNDSLVEEIEK
LKEENRRLRANY
NT seq 2019 nt   +upstreamnt  +downstreamnt
atggaggagctgacccggttggtgtcatcaggtgactgcctgaagatatgggactcagcc
tctatgactgtagtggagcagttcaatccccacagtgccacccaccctctggcccaagta
tgctggagcagcagcaatcagtacattgtcagtgccagcagtataggagacaagctggtg
gtgactagcctgaagtcttcaccagtccctgtaatggagcttgctgaagggaaaaagcag
acacgggttgctctaaattccacatcacagtttctggtcagtggtggcctagacaatacc
gttaacatctgggacttaaagacaaagagattgcaccgtagcctcaaggaccataaagaa
gaagtgacgtgtgtatccttcaatggtggtgatagctacatagcatctggttctaccagt
ggagacattatccttcacagcattaccaccaatctgtccagcaaaccctttggccatggg
cctaatgaaccagttcatgacctgaagtactcactgataaagcggtctttgttgggaagt
gtgtcagacagcggctctgtggtgctctgggatgctaacacacaaaaggaagtacacaca
tttgagggagcacacaaagctcctgcatcaggcctgtccttctcgcctgccaatgacttg
ctcttcatcacagtgggcttggacaagaagatcgtctgctatgacactgccagtaaaatt
attttccgtagtaagcaggtggagtcccctctcacagcggtggactttactccagatggt
gcggggctggtagtgggctccactcaaggaaggatctacatgtatgacttgcgtaattta
agtgcccctatcaaaactaccacagctcacaagacttcagttacctgcatccgatttcag
cactcaaatactagactaaagaccagtaaaacagtgtccagcaaggtttcctcaacgcag
tccaaaagaatatctgtgaaactggggcagaatcaacagagtggacctccaacccccacc
tccactgtgccctctagcatgcctgtcctcgaaaacctatcagagaatttagggaatact
ggtgatgtgtcttctaaggaggccgaagggcaacacagcctggacaaattcagcagtgtg
ggtcgaaacagtctgagtctggatgttttctcaccagttgctgatggtttgaaaacacat
ggttttagtggtgatactccaacatcaagaaatggaggcagcagcagtgcagatttgttc
tttcgagaagctgaaggccagcatggttcggacaagttcaaggtgggccgaaacagccta
gacattttctctcctgtccgagacgattataaaagttatagaatgagtgatgcctcaagt
ggaaagaaagacttagattttttacctcagtatcacggctcagctcagcgaaaaaaccca
ctgggcacacctggcagtcgctgctacagtccactgtctgctgtccaaacaccccctgct
atcaaagaggaagagcctgttacaacaatgcctccccatacagatgcgcagaacagtgta
atgatggagaagactaatggtccccggacagacgttatgaccacacctcctgcctctcag
actgcacatattcagcagtcagtgcctccattcaacacccctgagcccagtcagaggagg
gaagtgccgacccagctcacctatgactcccctgtgaatagtagccagcctgtaccagca
gcagaagcagcagctgcatctgctgctggaagtggtggagcaccgctcacatctgtccag
atgaattttgtacgcaacatgatccacgaagcactagaggacttcagggatacatgccat
agagacattattaacctccaggtggaaatggtgaggcagttctatattcagttgaatgaa
atccacggactcatagagagatactctgttaatgactctctcgtggaggagattgagaag
ctgaaggaggaaaacagacgactccgagcgaattactaa

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