KEGG   Astyanax mexicanus (Mexican tetra): 103045622
Entry
103045622         CDS       T05042                                 
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:amex00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    103045622
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:amex04121]
    103045622
Enzymes [BR:amex01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103045622
Ubiquitin system [BR:amex04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    103045622
SSDB
Motif
Pfam: SPRY zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-B_box RING_XB3-XBAT31 zf-C3HC4_3 PRY zf-RING_2 ANCHR-like_BBOX zf-RING_5 zf-C3HC4_2 zf_RING_Vps8 zf-UBR AAA_16
Other DBs
NCBI-GeneID: 103045622
NCBI-ProteinID: XP_049318949
Ensembl: ENSAMXG00000021388
LinkDB
Position
13:52410725..52415204
AA seq 588 aa
MQRSAARTGRTGSGVGVGFQSVSSCCWRYRSGSNDRARMNHRKESLELELSCAVCLQLYD
DPVSLPCGHSYCLQCVRSVQESQQTGGRPGGRPRCPECRQDYNGLESLLKNFKLGGIVER
YREAMSEQVLTAGKPTVPCDQCLDGAEPAVKTCLHCETLLCEGHLKRHQERHRSKGHTLV
EPLPDLDQRRCPDHRGELEFLCLQERRFLCNECVMEGKHVEHEVQMLEAAKSDLVLVVEG
LEKATSDRLQLTEALLRRAQERGMNSGVCTEVLSARATELLDNMVTLISEYKERMRNLLE
EEVREYDRAWQASVGTLKEYQQQLSSTQRLANDLLLTSPSNFLFLKLYIKQEPQLRQAAG
VTVPCLPIPQPADTKHLRTSLGTDTFRTDLTQLLQSLHALMNPLNLSFNPATVHSSLILS
TDFLTVKHWGGGRPSFTSGDQSERFCTSTQVMCSQALSSGAHVWTVEIGTGTMWSIGVCY
ASIPRKGDHSRIGHNAVSWRLQWKNKKLTACHDSISTTVTETPTVPPKRLEVALDYDKGT
LAFYNLAAKGRKLHLHTFRAMFREPLYPVFGLHSTTDESWITLLNAAI
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgcagcgttcagctgctagaactggtcggaccggttccggtgtcggtgttgggtttcag
tcagtttcctcatgctgctggaggtacaggagtggcagtaacgacagggcgaggatgaac
caccggaaggaaagtctggagctggagctgagctgtgccgtgtgtctgcagctgtatgat
gatccagtgtctttaccgtgtggtcacagttactgcctgcagtgcgtccgctccgtccag
gagtcccagcagaccggcggacgacccggcggacgacctcgctgccccgagtgccgccag
gactacaacggcctggagtctctgctcaagaacttcaagctcggtgggattgtagagcgc
taccgcgaggccatgtccgaacaagtgctgacggcggggaaaccgacggtgccgtgcgat
cagtgcctggatggcgcagagccggcggtgaagacctgcctccactgcgagacattgctg
tgcgaaggtcacctgaagcgacaccaagaacgacacaggtcaaaaggtcacaccctggtg
gagccgctgccggacctggaccagcggaggtgtccggatcaccggggcgagctggagttc
ctgtgcctgcaggagcgtcgcttcctgtgtaacgagtgcgtgatggaagggaaacacgtc
gagcatgaggtccagatgctggaggcggcaaagagcgacctggtgctagtggtggagggg
ctggagaaggccacgtcggaccggctgcagttgaccgaggctctgctccggagggcccag
gagcgcgggatgaactcgggggtctgtacagaggtcctgtcggcccgggcaaccgaactg
ctggacaacatggtgacgctgatctcagagtacaaggagcgaatgcggaacctgctggag
gaggaggtccgtgagtatgaccgggcgtggcaggcgagcgtcggtaccctgaaggaatac
cagcagcagctcagcagcacccagcgcctcgccaacgacctgctgctcacctccccatcc
aacttcctgttcctgaagctgtacattaaacaggagccacagctccgccaggccgccggc
gtcaccgtcccctgcctccccatccctcaacccgccgacaccaagcacctccggactagc
cttggtaccgacaccttccgcacagacctgacccagctgctccagagccttcatgcccta
atgaacccgctaaatctcagcttcaaccccgcgacggttcactccagcctcatcctgtcc
accgacttcctgacagtaaagcactggggtggtggacggcccagcttcaccagcggagac
cagagtgaacgcttctgcacctccactcaggtcatgtgttcccaggcgctgtccagtggc
gcccacgtgtggacggtggagatcggcacgggtaccatgtggtccatcggtgtatgctac
gctagcatcccgcgcaaaggtgaccacagccggatagggcacaatgccgtctcctggagg
ctccagtggaaaaacaagaaactgacggcctgccacgattccatcagcaccaccgtgacg
gagacacctacagtaccccccaagaggctggaggtggcgctagattacgataaaggaacg
ctggctttttataatttggcagcaaaagggaggaaactgcatctccacacgttcagagcc
atgttcagagaaccgctgtaccccgtgttcggactgcactccaccaccgacgagtcctgg
atcaccctgctgaatgcggccatttga

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