Astyanax mexicanus (Mexican tetra): 103045679
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Entry
103045679 CDS
T05042
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC6
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103045679
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
103045679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_RLD
RCC1
HECT
RCC1_2
Alsin_RLD
Motif
Other DBs
NCBI-GeneID:
103045679
NCBI-ProteinID:
XP_022540239
Ensembl:
ENSAMXG00000019740
LinkDB
All DBs
Position
7:complement(44767100..44787171)
Genome browser
AA seq
1036 aa
AA seq
DB search
MESHVNICSCTGSFGMFCWGDASRGQLLLPAAEGHYLPKPTFISIITERVVGVSCGENHS
LIVAENGRVFSCGRNSKGQLGRAKSKDTKQPVIEGLGGVAAVACGQEHSLALCDSGQVFS
WGAGGEGQLGLSTPVSKSSKPVLIQIPMILPIPVVQIACGNIHSLALTKGGEVFSWGQNS
YGQLGLGKSVPLQPVPAVIPALIGVPVIQISAGGEHTLALSCSGQVFCCGANSAGQLGLN
RTDEKGRFGVCAVPALKRLPVAYISCGAAHTAVLTKDGEVYTFGDGAHGQLGHSSTSREL
LPRKVEDIDGPAKQVTCGSHHTLVLMSSGVLYAFGHGVRGQLGNGSGKDSLQPVRLDELW
KDLAVKIQAEMRISSGWNSNFLFFPPPKPSVLGEPIGRLDDARVQRWVSMLERDRTTEIA
KREISLTFSTCSNIVACFLEESGAIGKSNSGTMAVDLDAASQTFDKLVKIPWIKKSINLI
PLVRSLWYGSAVMKCPEIFLLLPTCPILHEEQNTIEFVLPIAVALTKLNETAMKILKEHW
SAMDAPMMIKHISMWKSALSFLLKAKVWLDFIPGVKGVLEVLKYLYRSNKRVEKSRKVPI
SEFYIEEIGNVELLLQQDITLWRQIKWGQVEEMDMTPPVFCRYPFLLDLQSKIRILNYDS
AITKMTHHFIHNQVKMGLQPELFNPEAPLPIMLLKLRRTALLEDTFRHLSYTDHDNFKKE
LMVHFVEDSRQTAVNQRDFFLHVFTELIAPESEMFIYNDSQTMIWFPSKPKLESKKYFLF
GILCGLALNNSNIVHMPFPLAMFKKLVNVKPTLDDLIEFRPVIGESLRYLLYDYTDDDVE
NMELSFCIHWDGVDVELDPQERGKLVSRDNKKKFVDAYVDYTMNKSVEQVFEEFRRGFYK
VCDRDVVEFFQPEELRGVMVGTEEYDWDVFRQNTAYNGQYHTSHPTIITFWEVFEELTEE
QKKAFLLFLTGCDRVPILGMEQVKMTVSVLLNSTQEHLPESLTCHCLLMLPEYESKQRLQ
DKLVEALNHNRGFWRE
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccatgttaatatctgcagctgcactgggagcttcgggatgttctgctgggga
gacgcgtccagagggcagctgctgctgcccgcagcggaggggcattatctccctaaaccc
accttcatcagcatcatcactgagcgggtagtcggggtctcgtgtggggagaatcactct
ctgattgtggctgaaaatgggcgagttttctcctgtggaagaaactctaaagggcagctg
gggagagcgaagagtaaagacactaaacagccagttattgaaggtcttgggggagtagcc
gctgtggcctgtggccaggagcacagtttggctctgtgtgactcagggcaggtgttctcc
tggggagcaggtggagaaggacaactaggcctgagcaccccagtgtcaaaatcctccaaa
ccagtactgattcaaataccaatgatcctaccaataccagtggtgcagattgcttgtgga
aatatccattctcttgctttaacaaaaggtggtgaggtgttctcctggggccagaatagc
tatggtcagctggggctggggaagtctgtgcccctgcagcctgttcctgctgtgataccg
gctctaattggagtgccagtgattcagatctctgctggtggagagcacactctagccctc
tcctgttcaggacaggtcttctgctgtggagcgaacagtgcaggacagctgggtctcaat
aggactgatgagaaaggccgctttggagtttgtgctgttcctgctctaaagcggctgcct
gtcgcttacatcagctgtggagcagcacacactgccgtcctcactaaggatggagaggtc
tacacttttggagatggtgcacatggtcagctcgggcacagctccaccagcagggagctc
ctgcccaggaaagttgaggacattgacggaccagctaaacaagtaacctgtggcagccat
cacacactggttctgatgtcatctggtgtcctctatgcattcgggcatggagtcagaggt
cagctggggaacggtagtggtaaagatagcctgcagcctgtaagactggatgaactgtgg
aaggatttagcagtgaagattcaagcagaaatgaggatctcttctggctggaattccaac
ttccttttctttcctcctcccaagccttctgttctgggagagccgattggaagactggat
gatgccagagtgcagagatgggtctcgatgttggagagagacagaaccacagagatagct
aaaagggagattagcttgactttttcaacatgctcgaatatcgttgcttgtttcctggag
gaaagtggagccattggtaagagtaattctggcaccatggcagttgatttagatgctgcc
agccagacatttgacaagcttgtgaagattccttggatcaagaaatcaatcaacctcata
cctctggtgcgtagcctttggtatggttcagcagtgatgaagtgtccagagatcttcctg
cttctgcccacatgccctattcttcatgaagagcagaacaccattgagtttgtgctgccg
attgcagtggccttaaccaagcttaacgagactgccatgaaaatcctgaaggaacactgg
tccgccatggacgcccctatgatgatcaaacacatttccatgtggaaatctgcactttcc
tttctcttgaaggcaaaggtgtggttagactttatccctggagtgaagggtgtcctggag
gtcctcaaatatctgtacaggagcaacaaaagggtagagaagtcaaggaaagttcccatc
agtgagttctacatagaggagattggcaacgtagagctgttgctccagcaggacattaca
ctctggcggcagattaaatggggacaggtggaggaaatggacatgacgcctccagttttc
tgccgttacccattcctcctggacctacagagcaagatcaggattttgaactacgattct
gccataacaaagatgacgcaccacttcattcacaaccaggtgaagatggggctgcagccg
gagttattcaatccagaggcccctttgcccatcatgctgcttaaactgagacgcacagca
ctgctggaggacacgttcagacacctttcctacactgaccacgacaacttcaaaaaagag
ctgatggtgcattttgttgaagattccagacaaacagctgtcaaccaaagagacttcttc
ctccacgtctttactgagctcatagctccagagtcagagatgttcatttacaatgacagc
caaacaatgatctggttcccatccaagccaaaactggaatcaaagaagtatttcctgttt
gggatcctgtgtggcctggccctgaacaacagcaacatcgtgcacatgcccttccctctg
gccatgtttaagaagctggtgaacgtgaagcccactctggatgacctgatcgagttcaga
cctgtaatcggagagagtttgcgatatctactgtacgactacactgatgatgacgttgag
aacatggagctgtccttctgtattcactgggatggagttgatgtggaactggatcctcag
gaaagaggaaaactggtgtcaagggataacaaaaagaagtttgtggatgcctatgtggat
tacaccatgaacaaatcagtggagcaagtgttcgaggagttcaggaggggcttctataaa
gtgtgtgatcgagatgtggtggagttcttccagcccgaggagctgagaggagtaatggtg
ggcacagaagaatacgactgggacgtattccgacagaacacggcttacaatggacagtac
cacaccagtcaccccactatcatcactttctgggaggtgttcgaggagctgacagaggaa
cagaagaaggccttcctcttgtttctgacgggctgtgatcgcgtacccatcctaggaatg
gagcaggtgaagatgaccgtctctgtcctgctgaactccacccaggagcacctgcccgag
tccctcacctgtcactgcctcctcatgctcccagagtacgagagcaagcagcggctgcag
gacaagctcgttgaagccctgaaccacaacagaggcttctggagggagtag
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integrated database retrieval system
