Astyanax mexicanus (Mexican tetra): 103045746
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Entry
103045746 CDS
T05042
Symbol
csgalnact1a
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
amex01100
Metabolic pathways
Module
amex_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
103045746 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
amex01003
]
103045746 (csgalnact1a)
Enzymes [BR:
amex01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
103045746 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
103045746 (csgalnact1a)
Glycosyltransferases [BR:
amex01003
]
Glycan extension
O-Glycan
103045746 (csgalnact1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
FlxA
Csm1_N
ATG14
Motif
Other DBs
NCBI-GeneID:
103045746
NCBI-ProteinID:
XP_007228890
Ensembl:
ENSAMXG00000033210
UniProt:
A0A8B9JVK4
LinkDB
All DBs
Position
20:20789976..20835327
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AA seq
549 aa
AA seq
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MLRRGLLSCLSRVGVALVLVCCSLSLLYVITCSPHTDDPLSGPLLPRPGPLGSPVGHGPL
SGAPLGPPGGQGSYQALLQEREEQHRQHISSLKKQIAQLKEALQERGERVKGSPEKAGDR
GVGTGTIEERSHTDLQDFLRSQLSRAEVHSGVRLPSEYSVVPFESFTLQRVYQLEMGLTR
HPEEKPVRKDRRDEISEVLESALQTLNTPNLSRDRVASKVYSTADFIEGIARTEKDKGTL
YDLSFRGEQPQQFRRLVLFRPFGPLMKVSDERVQTQNTIINIILPLSHRADKFRHFMHNF
REVCIKQDRRVHLTVVYFGRDQMNDIKGMLENTSRELNFRNFTLIQLNEEFSRGRGLDVG
ARAWKGGNVLLFFCDVDIIFTSDFLNTCRLNTQPGKKVFYPVLFSQYNPAVIYGSREHVP
PIEQQLVIKKDTGFWRDFGFGMTCQYRSDFINIGGFDVDIKGWGGEDVHLYRKYLHSNLL
VIRAPSRGLFHLWHEKHCADELPPDQYKMCMQSKAMNEASHGQLGMLLFRHEIEAHLRKQ
KQRGASKKA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgccgggggttgttgtcatgtctctctcgagtgggcgtggctctggtgcttgtg
tgctgctctctctctctactgtacgtcatcacctgcagtcctcacaccgatgaccccctg
tccggccctctgctgcccaggccggggcccctggggtcccccgtgggtcacgggccgctc
agcggcgcccccctcggcccaccaggcggacagggtagctaccaggccctcctgcaggag
cgcgaggagcagcaccggcagcacatctccagcctgaagaagcagatcgcccagttgaag
gaggcgctgcaggagcgcggggaacgggtgaaggggtcgccggagaaagcgggggaccga
ggagtgggcaccgggaccatcgaggagaggagccacactgacctccaggacttcctgcgc
agtcagctgtctcgggcggaggtgcactcgggcgtgcgtttgccgagcgagtattcggtg
gtgccgtttgagagcttcacgctgcagcgggtgtaccagcttgagatgggactgacccgc
cacccggaggagaaaccggtgaggaaggaccggcgggacgagatcagtgaggtcctggag
agcgccctgcagaccctcaacacgcccaacctgagccgggaccgggtcgccagcaaggtc
tacagtactgccgacttcatagagggtatagcgcgtacggagaaggataaggggacgctg
tatgacctgtcgttccgcggggagcagccgcagcagttccgccggctggttctgttcagg
ccgttcgggccgctgatgaaggtgtcggatgagcgagtgcagacccagaacactatcatc
aacatcatcctcccactctcacaccgcgccgacaagttccgacacttcatgcacaacttc
agagaggtgtgtataaagcaggacaggcgagtgcaccttaccgtcgtctacttcggccga
gaccagatgaacgacatcaaaggaatgctggagaacacctcaagggagctgaatttccgg
aactttaccctgatccagctgaatgaggagttttcgcgtgggcgtggtttggacgtgggt
gctcgggcgtggaaaggtggaaatgttctgctcttcttctgcgacgtcgacatcatcttc
acctccgactttctcaacacctgtagactgaacacacagccaggaaagaaagtgttctac
cccgttctgttcagtcaatacaacccagcggtgatttacggcagcagagagcacgtcccg
cccatcgagcaacagctggtcattaagaaggacaccggcttctggcgggacttcggcttc
ggaatgacctgtcagtacagatcggatttcatcaacatcggtggttttgacgtggatatt
aaaggctggggcggcgaggacgttcacctgtaccgtaaatacctgcacagtaacctgctg
gtgatccgggcgccgtcacgcggactctttcacctgtggcacgagaagcactgcgccgac
gagctcccgcccgaccagtacaaaatgtgcatgcagtccaaggccatgaacgaggcgtcg
cacggccagctgggaatgctgctgttccgacacgagatcgaggcccatctgcggaaacag
aaacagcgtggcgcctccaagaaggcctga
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