Astyanax mexicanus (Mexican tetra): 103045805
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Entry
103045805 CDS
T05042
Symbol
ift57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amex03037
]
103045805 (ift57)
Cilium and associated proteins [BR:
amex03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
103045805 (ift57)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT57
MCPsignal
Med9
DUF4407
MscS_porin
PspA_IM30
Mod_r
Glyco_transf_25
Replic_Relax
KxDL
NET2A_C
HBM
DUF6058
DUF1664
TPR_MLP1_2
NPV_P10
BLOC1_2
DUF3837
COG3_N
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
103045805
NCBI-ProteinID:
XP_007237671
Ensembl:
ENSAMXG00000017051
LinkDB
All DBs
Position
4:complement(27928781..27944186)
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AA seq
413 aa
AA seq
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MAEDGRRVEEDERGPGAQFQMFVVMEDMLDKLKLLDYEEHVLVKHNMKTLSRHYFVSSPY
TASNTGEQFYMFSVIAAWLITLCGRPFETPQEHDDPNATVSNILSQLRALGGVVDFPPSK
LKSGSGEHVCYVLDRLAEEALKSRNFIWKKPVYPTEELEEEIVMEDDAELTLDKVEEIPE
EPDEEEDIIDLDELKNRTIQSEEAGGARPEMILESVTDSAEWNLEVERVLPQLKVTIRSD
VKDWRIHVNQMHQHQDGIKTSLKDAKGYLDKLLEEIAKTQEKVSSREKYINSQLEHLITD
YRNAQSKLSEARERYQQGSGGVTERTRTLAEISEELEKVKQEMEEKGSSMSDGAPVVKIR
QSLTKLKQEIQQMDVRMGVVEHTLLQAKLKEKNNMTRDMHATHITETSTHTYS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagatggtagaagagtggaggaggatgaacggggtccaggagctcaatttcag
atgtttgtggttatggaggatatgctggataaactgaagctgctggattatgaggaacat
gttctggttaaacacaacatgaaaacgctgtccaggcattattttgtgtcgagtccatac
acagcgagcaacacgggtgagcagttctacatgttcagtgtgattgcagcctggcttata
acactgtgtggacggccgtttgaaacaccacaggagcatgatgaccccaacgccaccgtc
tccaacatcctgtcccagctccgagctctgggtggggtggttgattttcctccttctaaa
ctaaagtctggttctggagaacatgtgtgttatgtcctggaccgccttgcagaagaagct
ctgaagagtagaaacttcatctggaaaaagcccgtctaccccactgaggagctggaggag
gagattgtgatggaagatgatgctgagcttacactggataaagtggaggagatacctgaa
gagcctgatgaggaagaggatattattgatctggacgagctaaagaacagaaccattcag
agcgaggaagcaggtggggcgaggccagagatgatccttgaatcagtcacagactcggct
gagtggaatctggaggtggaaagagttcttcctcaacttaaagtcaccattcgttctgat
gtcaaggattggcggatacatgtgaaccaaatgcatcagcaccaagacggcatcaaaaca
tctttaaaagacgccaagggctatctggataagctgctggaggagatcgctaagactcag
gagaaagtgagcagcagagagaaatacatcaactctcagctggaacatctcatcactgat
tacagaaacgctcagtctaaactcagtgaggctagagagagatatcagcagggcagtggc
ggtgtgactgagagaaccagaacactagcagagatcagtgaagagctggagaaagtcaaa
caggagatggaggagaagggtagcagcatgtcagatggagccccggtggtgaagatccgt
cagagcctgacgaagctgaagcaggagatccagcagatggatgtgagaatgggagtggtg
gaacacacgctgctgcaggccaagctaaaagaaaagaacaacatgacgagagacatgcat
gctacacacattacagagaccagcacacacacctactcataa
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