Astyanax mexicanus (Mexican tetra): 103045868
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Entry
103045868 CDS
T05042
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103045868 (msh4)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Meiosis-specific proteins
Others
103045868 (msh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
AAA_27
Motif
Other DBs
NCBI-GeneID:
103045868
NCBI-ProteinID:
XP_015462163
Ensembl:
ENSAMXG00000001485
LinkDB
All DBs
Position
14:complement(22375030..22385732)
Genome browser
AA seq
942 aa
AA seq
DB search
MNAQLLRSSTEEVTVGCSSDTGTSTSTPPVPRFTRAPLRRLQDSGPTPSPLSTSYGSDGA
STASCSGSTPAARPAPATTTAAAAAARVTLPVSHQTPAAAGVRRLSSSGSPWPISGAHSS
SSLTVRTPGSAGCTNAGRLPQRDLSMTTSSSATLSHSSSVIVAVVEGRGLARGEIGLSSI
NMKSPELVLSQFADTGTYAKVITKLHILMPLEILMPDTASEKGQGTKLFNLITENVPSVS
FTAIQRKYFNERKGLEYIQQLCAPEFSTVLMEVQTKYYCLASAAALLKYVEFIQNSVYAP
KSLKVSFTGSEQTTMIDSVSAKNLELVINNRDQRSDHTLFGVLNHTKTPGGGRRLRSNIL
EPLLDVDTINTRLDAIQELLQNEELFFGLKSAITHFLDVDQLLSSLVQVPKQETVAVAEA
KILQVIQLKHTLELIAPLTEVLKNAKTALLKAYHTSLEDGRFKSILDEIKTVINDDTTSL
KGSLNMRTQKCYAVRPNVNEFLDIARRAYTEVVDDIAGLVDQLGEKYGLPLRTIFSTARG
FFIQLSLEGVVLPEGHLPEEFIKVTRQKNNYSFTTLDLMKMNSRCEEALKEIFHMSYMVI
CRLLNGVYEQIHCLYKLSDAVSMLDMLLSLANACTLSDYVRPEFTDTLAIKQGCHPTLER
ITGKQPISNNSYISEGSNFVIVTGPNMSGKSTYLRQVALCQIMAQIGSFVPAEYASFRVA
DQIFTRIGVDDDFETNSSTFMVEMKEVSYITHTASERSLIIIDELGRGTSAEEGIGICHA
VCEFLINLKAFTLFATHYLELCQLETLYPNVENQHMQVQHIRREDNSTESVVYTYLLTRG
FSEERNYGIRAAEMTSMPPSIIQEAKSIAAKVSQKLWGKHHSDPSTQRQRADYHLAMRCV
QTARNSRLDSDSLCLYLKGLKRQYEAELKSILEGHEHGVNPA
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcagctgctcagaagcagcacggaagaggtgacggttggttgtagctcagat
accggcacaagcacctccacaccccctgtcccccgctttacccgggctccactccggcgg
ctgcaggactccggccccacgccctcacctctctccacctcatacggctctgatggcgcc
agcaccgcttcatgctctgggtcaacgcccgccgcgcgtcctgctcccgctactactact
gctgctgctgccgccgccagagtaacgttaccggtctcacaccaaacaccggctgcggca
ggtgtgagaagattaagctcctctggttccccatggccaataagtggtgcccacagctcc
agcagtctgactgtgaggactcctggatcagcagggtgcacaaatgctggacgactacct
cagagggatcttagcatgacaacatcttcatctgccactttgtctcattcctcctctgtg
attgtggctgtggtggagggcagaggtttagcccgaggagagattggcctgtccagcatc
aacatgaaatcccctgagctggttctctctcagtttgcagacactgggacatatgcaaag
gttattaccaaactccatatattgatgccacttgagattctaatgcccgacactgctagt
gagaaaggccaggggaccaagctgttcaatctcatcacagaaaatgttccgtcggtatct
ttcactgccattcagaggaagtactttaacgagaggaaagggctagagtacatccagcag
ctttgtgcccctgagttcagcactgttcttatggaagtacaaaccaagtactactgcctt
gcatctgcagctgcccttcttaagtacgttgaatttattcagaactctgtctatgcaccc
aagtctcttaaagtgagcttcactggcagtgagcagactactatgattgactctgtctca
gccaagaacctggagctagtgattaacaacagggaccaaaggagcgatcacactctgttt
ggtgtcttgaaccacaccaaaacccctggaggtggtagaaggcttcgctccaacattctg
gaacctttgctagatgttgacaccattaatacgcgccttgacgccatacaggaactgttg
caaaacgaggaactgttttttggtctgaagagtgcaattacacacttcttggatgtagat
caactactttcttctcttgttcaagtccccaagcaagagacggtggcagtggctgaggca
aagatattgcaagtcattcaactgaagcatactctagaactgattgctccactgacggag
gtgttaaagaacgcaaaaacagcgttgctgaaagcatatcacacttcactggaagatggc
aggttcaagagcatattggatgagatcaaaacagtaatcaatgatgacaccacctccctg
aaaggcagtctgaacatgcgcactcagaagtgctatgctgtgcgccctaatgtcaatgaa
ttcctagacatcgcacggcgagcctacactgaggtagtggacgacattgcaggattggta
gatcagctgggagagaagtatggcctgcccctgcgcaccatttttagtactgctcgtggc
ttctttatccagctaagcttggagggtgtggtcttgcctgaaggacatcttcccgaagag
ttcattaaagtaaccagacagaaaaacaactacagcttcaccactttagacctgatgaag
atgaattctcgctgtgaggaggccctgaaggagatatttcacatgtcttatatggtgatt
tgccgcctactaaatggtgtttacgagcagatacactgcttgtataagctgtctgatgct
gtgtccatgctggatatgttgctctccctggctaatgcttgcacactctcggactatgtg
cgccctgagttcactgacacactggcgataaagcaaggctgccatcctaccctggaacgg
attactggcaagcagcccatctctaacaacagctacatatctgaaggaagcaactttgtt
attgtcacaggccccaacatgagcggaaagtccacgtaccttagacaagttgccctttgc
caaatcatggctcagatagggtcatttgtacctgctgaatatgcctcctttcgtgttgct
gatcagatattcacccgaattggagtagatgatgattttgagacaaactcatcaacattt
atggttgagatgaaagaggtgtcatacataacgcacactgcaagtgaacggtcactcatc
attattgatgagctgggccgtggcactagtgctgaggagggcattggtatctgccatgca
gtctgtgaattcctaatcaatttgaaggctttcactctgtttgctacccactacttggaa
ctgtgtcagttggagactctgtatcctaatgtggagaaccagcacatgcaggttcagcac
attcgcagggaagacaacagcacagagagcgtggtctatacctatctgctgactcggggc
ttttctgaggaacgcaattatgggatacgagcagcagagatgacttccatgccaccatcc
atcatccaggaggcaaagtctattgcagccaaagtcagccaaaagttatggggaaagcat
catagtgacccatccacacagcgacagagagcagactatcatcttgccatgagatgtgtg
cagactgcccgaaactccaggctggattctgacagcctgtgcctttacctgaagggtctg
aagagacagtatgaggcagagttaaaaagcatcctagagggccatgaacatggagtgaat
cctgcctga
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