Astyanax mexicanus (Mexican tetra): 103045871
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Entry
103045871 CDS
T05042
Symbol
cthrc1b
Name
(RefSeq) collagen triple helix repeat-containing protein 1 isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amex03037
]
103045871 (cthrc1b)
Cilium and associated proteins [BR:
amex03037
]
Other cilia and associated proteins
Stereociliary proteins
103045871 (cthrc1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
103045871
NCBI-ProteinID:
XP_015456272
Ensembl:
ENSAMXG00000039302
LinkDB
All DBs
Position
1:complement(116636658..116658658)
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AA seq
233 aa
AA seq
DB search
MEQLTVPARVLLFICLIFPCQGAERAKQRGIRQKDMEYMEKYSSCLQGPAGIPGKEGNPG
VNGIPGTPGVPGRDGAKGEKGECVSEIFEEPWRPNYKQCAWNSLNYGIDLGKITECTFTK
LRSDSALRVLFSGSLRLKCKTACCQRWYFTFNGAECSGPLPIESIIYLDQGSPELNSTIN
IHRTSSVEGLCEGVRAGLVDVAIWVGTCGDYPRGDASTGWNSVSRMIIEELPK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctaacggtcccggccagagtcctgctgtttatctgcctaatattcccctgc
cagggagctgagcgagccaaacagagaggaataagacagaaggacatggagtacatggag
aaatactccagctgcctgcagggtccagcaggaatcccgggcaaggagggaaatccggga
gtgaacgggatcccgggaacgccaggtgtgccgggaagggacggggccaagggggagaag
ggggaatgcgtcagtgagatatttgaggagccctggagacccaactacaaacagtgcgcc
tggaactccctcaactacggcatcgacctgggcaaaatcacagagtgcacgttcaccaag
ctgcgctctgacagcgccctgcgtgtgctcttcagcggctcgctcaggctcaagtgcaag
acggcctgctgtcagcgctggtacttcacctttaacggagcggaatgttccgggccactg
cccatagagtccatcatctatctggaccaaggcagcccagaactcaactccaccatcaac
attcaccggacctcgtcagtggaaggcttgtgcgagggcgttcgagctggactggtggac
gtggctatctgggtggggacctgcggggactatccccggggagacgcctccaccggctgg
aattccgtctccaggatgatcattgaagaactgcccaaatga
DBGET
integrated database retrieval system
