Astyanax mexicanus (Mexican tetra): 103045892
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Entry
103045892 CDS
T05042
Name
(RefSeq) TBC1 domain family member 8
KO
K19951
TBC1 domain family member 8/9
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103045892
Membrane trafficking [BR:
amex04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103045892
Endosome - Golgi transport
Rab GTPases and associated proteins
103045892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_7
EF_EFCAB10_C
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
103045892
NCBI-ProteinID:
XP_022523000
LinkDB
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Position
11:complement(337437..364340)
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AA seq
1102 aa
AA seq
DB search
MWLTPEEVSQKNALKLWVTEKSNDYFILQRRRGHGDSGGKITGMLVGALDTVLDSNARVA
PFRILLQVPASPVSWVIASGATVEEVQKHWKWLDQNLLPYMAVFENKQDAASFAQGKVKG
LIAEEVLAGQAALEDDPARFREVLARFEQRFGLPQQEKLVAHYSCCCWKGRVPRQGWLYL
STNHLAFYSFLLGKEVKLQVPWVEVTGMEQTTLGLMTDVIRVRTRQKQREFSMFLNVDEV
MTVMTQLADLALRRLLDSGGLEVDQSLQQATNITKRVLEQQALRQYVLSLLGLPRSEKLQ
EVLSCSVWTPHARCHTPGKLYTTDNYMGFSSRQEGVCTLLIPLAEVQSIEKAESTSALPN
PVIISVKSKKAFQLIDLAQRDELVDNLTDRLRCLHWRQAVFRGNSQRKKSLISPTPYYTF
YYDTDTLSPEEGDGVSDEALRNTVLTESLITTFQTGQSQSPNHKTTSEQLKVRLWEDHFE
EFGRGVHMFRTDKIRKLVAMGIPESLRGEMWLTFSDACSSLSAHPDYYSDLVSRSMCETS
VATEEIERDLHRSLPEHSAFQNQTGISALRRVLTAYAHRNPNIGYCQSMNILASVLLLYT
REEEAFWLLVTVCERMLPDYFNHRVIGAQVDQSVFEELIRERLPSLSESVPDLSPLASVS
LTWFLTLFLSVLPFRSALHVLDCFFYHGIKAVFQLGLAVLDANAAELSTSTDDGQALMTL
TSFLEQVRDDDEPCVCAEEAGPAGHTHITTLINDAHEKFGDLTVRQLEKMRSRHRIHVLQ
NHEDTTKENTLRLVSPDVSLSQEDLSSLYDLFKTEHFISLYWGDGVCREVRAGGRGYTES
YHVDRAQFKSLYLLLTPWPCGPHTDTMAQRTFALLDQNHHNRISFTQFSRWLDTLYCEEF
NEKVRLLYRLHIPPALTENEDQSSAGKNPILSTNRPLYVDLPNVERKTHEEQLKQMLKDL
AKEREKGQEKPLPQMKQREFVQFCKTLCCMFHGDSAENELFQAIAMVTSLVLQIGEARNK
GRRPSGAEPEEGKSPDRAASDPAEVEGDWTVSFEQILASLLTEQALVNFLERPVDLNHKI
CSAKEKQYQTRSGLLMIQSKTR
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgtggttaactcctgaagaggtttcccagaaaaacgccctgaagctctgggtgacagaa
aaatccaacgattacttcatcctgcagcggaggagaggacatggagacagcggggggaaa
atcacaggtatgttggtgggggcgctggacaccgtgttggactccaacgctcgagtggct
ccgttccggattcttcttcaagtgccggcgtcaccggtcagctgggtcatcgccagtgga
gctacagttgaggaggtgcagaaacactggaaatggctggatcagaacctgctgccgtac
atggccgtgtttgagaataaacaggatgctgcaagcttcgctcagggaaaagtcaagggt
ctgatagctgaagaggttctggccggtcaggctgctctggaggatgatccggcccggttc
agggaggttctggcgcggttcgagcagcggttcggtctgcctcagcaggagaagctggtg
gctcattattcctgctgctgctggaaggggcgggtccctcggcagggctggctctacctc
tccaccaatcatctcgccttctactcattcttactggggaaggaagtgaagctacaggtg
ccgtgggtggaggtgacggggatggagcagacgactctgggcctgatgacggatgtgatc
cgggtgcggacgcggcagaagcagcgagagttctccatgtttctgaacgtggacgaggtg
atgaccgtgatgacccagctggccgacctggcgctgcgcagactgctggacagcggtgga
ctggaggtggaccagagcctgcagcaagccaccaatattaccaaacgagtgctggagcag
caggctctgaggcagtatgtgttgtctctgttggggttaccgcggtcggagaagctgcag
gaggtgttgagctgctcggtgtggactcctcacgctcgctgccacacacccggaaaactc
tacaccaccgacaactacatggggttcagcagccgccaggagggagtctgtaccctcctc
atcccactcgcagaggtccagtccatcgagaaagcggagagtacgagcgctctgccgaac
ccggtgatcatcagcgtgaagtctaagaaagcttttcagctgattgatttggcacagagg
gacgagctggtggataatctgactgaccggctgcggtgtctgcactggagacaagccgtg
ttcagaggaaacagtcagcgcaaaaaatcactgatctctccgactccatactacacgttt
tattacgacacagatactctgagcccggaggagggtgatggtgtttctgatgaagctctg
aggaacacagtgctgaccgaatctctcatcaccacctttcaaaccggccaatcacagtcc
cccaaccacaaaactacatcagagcagctgaaggtgcggttgtgggaggatcactttgag
gagttcggtcggggggtgcacatgtttcgcacggataagatccggaaactggttgccatg
gggatccccgagtccctgcgcggagagatgtggctcaccttttcagacgcctgctcgtct
ctctctgctcacccggattattactcagatctggtgagcaggagtatgtgtgagaccagc
gtggcgactgaggagatcgagagagacctgcaccgctctctacccgaacactccgccttc
cagaaccagaccggaatctctgctctgaggagagtcctgaccgcctacgctcaccgaaac
cccaacatcggatactgccagtctatgaacatcctggcgtcagtgctgttgctctacaca
agggaagaggaggcgttctggctgctggtgacggtgtgtgagaggatgctgcctgattac
tttaatcacagagtcatcggtgctcaggtggatcagtcggtgtttgaggagctgatccgg
gagcgtttgccgtctctctctgaaagtgttccggatctgtctccgctggcgtcggtgtct
ctgacctggttcctcacgctgttcctgagcgttctcccgttccgcagcgcgctccacgtc
ctcgactgcttcttctaccacggcatcaaagccgtgttccagctggggctcgccgtgctg
gacgccaacgccgccgagctcagcaccagcaccgacgacggccaggccctaatgaccctc
accagtttccttgaacaggtgcgagatgacgatgagccgtgtgtgtgtgctgaggaggcg
ggacctgctggacacacccacatcaccacattgatcaatgatgcgcatgagaaatttggg
gacctgacggtgagacagctggagaagatgagaagtagacacaggattcatgtcctgcag
aatcatgaggacaccactaaagagaacactctcaggctggtctcacctgatgtctcactg
tctcaggaggacctgtctagcctttatgacctgtttaagacagagcactttatcagtctg
tactggggggacggagtgtgtagggaggtgcgggcggggggtcgggggtacactgagagt
tatcatgtggaccgggctcagtttaagagtctgtatctgctgctgaccccgtggccctgc
ggcccccacaccgacaccatggcccagagaaccttcgccctgctggaccagaaccaccac
aaccgcatcagcttcacacagttctcccgctggctcgacactctgtactgtgaagagttt
aatgagaaggtccggctcctctatcgcctccacatccctccagctctgactgagaatgaa
gatcagtcttctgcagggaagaaccccatcctttccaccaacagacccctctatgtggat
ctaccaaacgtggagaggaagactcatgaggagcagctgaagcagatgctgaaggatttg
gctaaagagagggagaaaggccaggagaaacccctccctcagatgaaacagcgggagttc
gttcagttctgtaagactctgtgctgcatgtttcacggggacagcgcggagaacgagctc
ttccaggccatcgccatggtcaccagcctcgtcctgcagatcggagaggccaggaataaa
gggcgtcggccgtcgggggcggagcctgaggaagggaagagcccggatcgggcggcctcg
gacccggcggaggtggaaggtgattggacggtgagttttgagcagatcttggcctcgctg
ctcacagagcaagctctcgtcaacttcctggagagacccgtcgacctgaaccataagatc
tgctctgccaaggagaagcagtaccagacccgatccggactgctgatgatccagagcaag
accagatga
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