Astyanax mexicanus (Mexican tetra): 103045901
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Entry
103045901 CDS
T05042
Symbol
cxxc1b
Name
(RefSeq) CXXC-type zinc finger protein 1b isoform X1
KO
K14960
COMPASS component SPP1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103045901 (cxxc1b)
03036 Chromosome and associated proteins [BR:
amex03036
]
103045901 (cxxc1b)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
103045901 (cxxc1b)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
103045901 (cxxc1b)
COMPASS/SET1 complex (yeast)
103045901 (cxxc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
MutS_IV
Motif
Other DBs
NCBI-GeneID:
103045901
NCBI-ProteinID:
XP_007237592
Ensembl:
ENSAMXG00000006383
UniProt:
A0A8B9H642
W5KG35
LinkDB
All DBs
Position
24:complement(251929..258303)
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AA seq
562 aa
AA seq
DB search
MDSELSDMDHTPALDNSSMEEENAPLYCICRKPDINCFMIGCDSCNEWFHGHCINVTEKM
AKAIREWYCKRCQDKDPSLEIKYRSKKNREKDGEIHRAEKRSSTPDFKLEKRRGSKVKRS
ARMCGECEPCRRTEDCAQCDFCKDMKKFGGPNKIRQKCRLRQCVVRARKMLRVRDEELSL
RERRDNIMHRRYSDEFDGNEMELFQQYKEQNLMWGSEDEDVPVFSPVRRKKAIKVKHVKR
REKKFDKKKESRRHKQKQKHKDRIRHNSRVDGRQVGDLHQCLGPNCIEAARPNSKYCSED
CGMKLAANRIYEILPQRIQQWQQSPCVAEEQGRKQLERIRREQQAARLRLAEMERRFHEL
EGIIAKAKQQDVQQDEEVSETEGEDTDLQIFCVSCSHPINPKVALRHMERCYAKYESQTS
FGSIFPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPVDEVCGCPLVRNVFE
ESGEFCRVSKRKCNKHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVRTAMTNRAGLLA
LMLHQTIQHDPLTTDLRSNKDR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgagttgtcagacatggatcacactccagctctggataacagcagcatggag
gaggagaacgctccgctctactgcatctgtcggaaaccagatatcaactgttttatgatc
ggctgcgacagctgtaacgagtggtttcatggtcactgtataaacgtaacggagaagatg
gccaaagctatcagagagtggtactgcaagagatgccaagacaaggacccgtctctagag
atcaaatatcgatccaagaagaatcgagaaaaggacggagaaattcaccgagctgagaaa
cgctccagtactccagacttcaaactggaaaaacgcagaggatctaaagtgaagcgttca
gcgcggatgtgtggtgagtgtgaaccctgccggcgcaccgaggactgcgctcagtgtgat
ttctgcaaagatatgaaaaaatttggaggcccaaacaaaatccgtcagaaatgtcgactg
aggcagtgtgtcgttcgcgctcggaaaatgctgcgagtgcgggatgaggagttatctctg
cgcgagaggagggataatataatgcacagacgatactcggacgagttcgacgggaacgag
atggagctgttccagcagtacaaagagcagaacctgatgtggggcagtgaggacgaggac
gtcccggtgttcagtccggtccgccgcaaaaaagctattaaagtcaaacatgttaaacgc
agagagaagaaatttgacaaaaagaaagagtcccggcgtcacaaacagaaacagaagcat
aaagaccgaattcggcacaacagccgagtggacgggcggcaggtcggtgatttacaccag
tgtctcgggccgaactgcatcgaggcggcgcgacccaactccaaatactgctctgaggac
tgcggcatgaaactcgcagccaaccggatatacgagattttgccgcagcggatccagcag
tggcagcagagtccgtgtgtggcggaggagcagggcaggaagcagctggagcgaatcaga
cgcgagcagcaggccgcccgccttcgcctcgccgagatggagcgccgcttccacgagctg
gagggaatcatcgccaaggccaagcagcaggacgtgcagcaggacgaggaggtgagtgaa
actgagggcgaggacacggacctgcagatcttctgtgtgtcctgcagtcaccccattaac
cccaaagtggcgctgcgtcatatggagcgatgctacgccaagtatgagagtcagacgtcg
tttggatctattttcccgacgcgaattgaaggggcgacgaggctgttctgtgatgtttat
aatcctcagagtaaaacttactgtaagaggcttcaggttttgtgtccggaacattccaga
gacccgaaggtgccggtggatgaggtgtgcgggtgtccgttagtgaggaacgtgtttgag
gagtcgggggagttctgcagggtctcgaagaggaagtgtaataaacattactgctgggag
aaactgaggagagcagaggtggatctggagcgcgtcagagtgtggtataagctggacgag
ctgtttgagcaggagcgaaacgtccggacggcgatgaccaaccgagccggactcctcgcg
ctgatgctgcaccaaaccatccagcacgacccgctcaccaccgacctgcgcagcaacaag
gaccgataa
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integrated database retrieval system
