Astyanax mexicanus (Mexican tetra): 103045922
Help
Entry
103045922 CDS
T05042
Symbol
otpa
Name
(RefSeq) orthopedia homeobox a isoform X2
KO
K24901
homeobox protein orthopedia
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103045922 (otpa)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
103045922 (otpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
TFIIA
Homeobox_KN
Neugrin
Peptidase_S26
Presenilin
VPS13_N
DUF7500
EOS1
Motif
Other DBs
NCBI-GeneID:
103045922
NCBI-ProteinID:
XP_007241265
Ensembl:
ENSAMXG00000005573
LinkDB
All DBs
Position
17:complement(23792038..23799418)
Genome browser
AA seq
339 aa
AA seq
DB search
MLSHADLLDARLGMKDAAAELLGHREALKCRLAGGGGGGGGGGAGADPVHPGELPPGSDT
VEGATLLPGDDISSAAAGVPVNGKDQDKHQHHQQQQHQQQHQQQQQQQNQQNQQQNPAQQ
TQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWK
KRKKTTNVFRAPGTLLPTHHGLPQFPSAMGDGLCSFHANDTRWAAAGMPGVSQLQLPPAL
GRQQAMAQSLSPCSLSAGPPPTSMGLSNMSSNGSSLQSHLYQPAFPGMVPASLSGPTSAA
AAGGSPQLCSSPDNDVWRGTSIASLRRKALEHTVSMSFT
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgctctcgcacgccgatctgctggacgctcgcctcgggatgaaggacgccgcggctgag
ctgctcggtcaccgggaagcgctcaagtgtagactggccgggggaggtggtggaggaggt
ggaggaggcgcgggagctgaccccgttcaccccggagagctcccgccaggctcggacacg
gtggaaggcgcaacgctgctcccgggagatgacatcagcagtgccgccgcgggagttccg
gtgaacggaaaggatcaggacaagcaccagcatcatcagcaacaacaacatcaacaacaa
caccaacaacagcagcagcagcagaaccagcagaaccaacagcagaaccccgctcagcag
acccagaagcagaagcggcaccgcactcgtttcaccccggcacagcttaacgagctcgag
cgcagcttcgccaagacgcactacccggacatcttcatgcgcgaggagctcgcgcttcgc
attggactcacggagtcgcgtgtgcaggtgtggttccagaaccggcgcgcgaaatggaag
aaacgcaagaagaccaccaacgtgttccgcgcgcccggcacgctcctgcccacgcaccac
ggcctgccccagtttccctccgccatgggggacggcttgtgctccttccacgcgaacgac
acgcgctgggcggcggcgggcatgccgggcgtgtctcagctgcagctcccccccgcgctc
ggccgccagcaggccatggcgcagtctctgtccccgtgcagcctgagcgcgggcccgccg
cccacctccatggggctctccaacatgtcgtccaacggctcgagcctgcagtcgcacctg
taccagcccgctttcccgggcatggttcccgcctcgctctcgggccccacgagcgcggcg
gcggcgggaggatccccgcagctctgcagctcgccggacaatgacgtgtggaggggcacg
agcatcgcgtcgctgcgccgcaaagcgctggagcacacggtgtccatgagcttcacctaa
DBGET
integrated database retrieval system
