Astyanax mexicanus (Mexican tetra): 103046058
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Entry
103046058 CDS
T05042
Symbol
optc
Name
(RefSeq) opticin
KO
K08127
epiphycan
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
amex00535
]
103046058 (optc)
Proteoglycans [BR:
amex00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
103046058 (optc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
LRR_NXF2
LRR_5
DNA_primase_lrg_N
Motif
Other DBs
NCBI-GeneID:
103046058
NCBI-ProteinID:
XP_022538412
LinkDB
All DBs
Position
24
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AA seq
324 aa
AA seq
DB search
MMLHVTILAVVLLGSCWAAPPLDVNPADLDLENYDVDSDTWDLNIHGETYDYDDLNEEIE
VDTVAPPPAVTQPPPVIIPEDYTEEVTLPPRTTNPQVPPTLDFLGPGLFGPETGLGMPVC
LLCVCISGSVYCDESDLTTIPPLPKKTTHFYARFNKITEVKPKDFLNQNELKRIDLTGNQ
ITSLAEDAFRSLPQLQDLLLVDNKIRALPELPATMRHIDLRNNRLQSAGMHREAFKEMKE
LQFLYLSDNQLDYIPGPLPDSLRVLHLQNNNIQSLNQDTFCNSHDMNYVRKALEDIRLDG
NPVDINQYAQAYVCLPRLPVGTPR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgcacgtaactatcctggcagtggtcctgttgggatcgtgttgggcggcccca
ccgcttgacgtgaaccctgcagatttagacctggagaactacgatgtggactcagatacg
tgggatctgaacatccacggagaaacgtatgactatgatgacctgaacgaggagattgag
gtcgacactgtagctcctccccctgctgtcactcaaccacctcctgtgatcattcctgag
gactacacagaagaagtgaccctcccaccacggaccaccaaccctcaggtcccgcccacc
ctggacttcctgggcccgggcctgttcggccccgagaccgggctggggatgcccgtgtgt
ctgctgtgtgtttgcatcagtggaagtgtgtactgcgacgagtccgacctaaccacgatc
ccccctctgcccaaaaaaaccacacacttctatgcccgcttcaacaaaatcacagaggtc
aagcccaaggactttctcaaccagaatgagctgaagcggattgatctcactgggaatcag
atcacgtcgctggcggaggacgccttcagatctctcccgcagctccaggacctgctgctg
gtggacaacaaaatccgggctcttcccgagctgccagccaccatgcggcacatcgacctc
cgcaacaaccggctgcagagcgccggcatgcaccgggaggcctttaaggaaatgaaagag
ctgcagttcctgtacctgtccgacaaccagttagactacatcccgggcccgctgcccgac
agtctacgagttcttcacctacagaacaacaacatccagagcctgaaccaggacaccttc
tgcaacagccacgacatgaactacgtccgcaaggccctggaggacatccggctggacgga
aaccctgtagacatcaaccagtacgcccaggcctacgtgtgcctcccgcggctgcccgta
gggaccccgcgctga
DBGET
integrated database retrieval system
