Astyanax mexicanus (Mexican tetra): 103046165
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Entry
103046165 CDS
T05042
Symbol
smg9
Name
(RefSeq) protein SMG9
KO
K18735
protein SMG9
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103046165 (smg9)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
103046165 (smg9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
GBP
AAA_30
DUF6079
AAA_16
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
103046165
NCBI-ProteinID:
XP_007250868
Ensembl:
ENSAMXG00000016249
UniProt:
A0A8B9JSR1
LinkDB
All DBs
Position
11:7891775..7900812
Genome browser
AA seq
504 aa
AA seq
DB search
MSESGHSQPGLYGQGRRRRRRRDREPGPPGQNLSGPSRDRDFGPRERRDGSEEPPGPLLQ
KTPIILAKPPGERSKQNAPVGGTPLEKPIMLMKPREEGGKSFAAPETAPPASGPGVAKLE
REGQRPTQPVYQIQNRGMGSAASTGAVDPVIGQTKLLPPEKMKHSIKLVDEQMNWCDSAM
EYLRDQTDMLVVGVIGLQGTGKSTIMSFLSANTPEEDQRSYVFRAQTQEIKERGGNQSCG
IDFYITQERVIFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQIAAFLFTVC
HVVIVVQDWFTDINLYRFLQTAEMLKPSTPSASHDSTGSSGPDDGSEYYPHLIFLQNKAR
REEFCPRNLKNMHMVVDKLMAHSHLKYKGTLSMLDCNIFPGLERDYLGTEVNLFLLPLLE
NDGDEALTRAGSGSTPLFSLLPGYRGHPSFSSLVSKLRSQVLAMSRNQLSHTILTEKNWF
HYAARIWDGVKKSSALSEYSRLLS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtctggacacagccagcccgggctgtacggacagggccggaggaggcggcgg
cggagagacagggaacccgggccgcccggccagaacctctctgggccgagccgagaccgg
gattttggtcctcgggagcggcgggatggaagtgaagagccccctggtccgctcctccag
aaaacccctatcattctagccaagcctcccggagagaggtcaaagcagaatgctccagtt
ggtggtacccctttggagaagcctatcatgcttatgaaacctagagaagaaggagggaaa
tcttttgctgcccctgaaactgcacctccagcatctgggcctggagttgcaaagctggag
agggaaggccagcgcccaacgcagccagtctaccaaattcagaaccggggcatgggctct
gctgcttctactggggctgttgaccctgtgattggccagaccaagcttctcccacctgag
aagatgaagcacagtatcaagctggtggatgaacagatgaactggtgtgacagtgctatg
gagtacctgcgtgaccagacagacatgctggttgtaggagtcataggactgcaggggaca
ggaaagtccacaatcatgtctttcctctcagctaacacacctgaagaggaccagagatca
tatgtgtttagagctcaaacccaagagatcaaagagcgaggaggcaaccagagctgtggg
attgacttctacatcacgcaggagagagtcattttcctggacacgcagccgattctaagc
ccctccatcttggatcatctcattaataatgaccgcaagctgccccctgaatataacctt
ccacacacatatgtagagatgcagtccctgcagatagctgcctttctcttcactgtgtgc
catgttgtaatagtggtccaagactggtttacagacatcaacctgtacaggtttcttcaa
actgctgagatgctaaagccctcaactccatctgccagtcatgacagcaccggatcctca
gggccagatgatggatctgaatactatcctcacctcatcttcttgcagaacaaagcaaga
agggaggaattctgtcctcgaaacctgaagaacatgcacatggtggtggacaagctgatg
gctcactctcatctaaaatataaaggtacattgtccatgctggactgtaatatcttccct
ggacttgaacgggactatcttggaactgaagttaatctctttcttttgccactgctggag
aacgatggtgatgaagccttgacaagagcaggatcaggatctacgccgcttttctccctg
ctgcctggctacaggggccaccccagcttctcttcacttgtgtccaaactccgcagccaa
gttcttgctatgtctcgtaatcagctctcacacaccatcctcacagagaaaaactggttt
cactatgctgccaggatttgggatggtgtgaagaaatcttctgccctgtctgaatatagt
cgcttactgtcataa
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