Astyanax mexicanus (Mexican tetra): 103046234
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Entry
103046234 CDS
T05042
Symbol
tbc1d17
Name
(RefSeq) TBC1 domain family member 17 isoform X2
KO
K19945
TBC1 domain family member 17
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
103046234 (tbc1d17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103046234 (tbc1d17)
Membrane trafficking [BR:
amex04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103046234 (tbc1d17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
103046234
NCBI-ProteinID:
XP_022529599
Ensembl:
ENSAMXG00000018030
LinkDB
All DBs
Position
19:complement(17828762..17852199)
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AA seq
638 aa
AA seq
DB search
METENRKLIFEKEGVYLHTNAKRSNQDTTIPGFIRIVEKDGESVLEWSPVQDDGKNAPAV
FYAKKDGEGGEEETNFDPGYEPDWAVIGTVKQNREKEKTPVRDTGHWGSFSLPLSELYSL
RRARFSLGRNFMVLTSRGGDPLPPLHFHRGGTRELFRAMQRYIRLVPSPVDGRLFLAYPH
DSGALSQSFDELQLFDDGSSDLVSRFIQDPYATTFGGFSKVTNFFRGALRPPESPLHSRS
PPEPNSAHPPDDEPGFELITCGAELGPRPKVTRGQPLDNWEQFLDPEGRVTDPQKVKELV
FRGGIIPSLRKEVWKFLLGFYPWNSTAKEREDIIRVKTDEYFRMKVQWKSVSEEQEMRNS
LLRGYRSLIERDVNRTDRQNSFFSGNENPGLKLLHDVLMTYCMYNFDLGYVQGMSDLLAP
LLFVTQNEVESFWCLTGFMDLVHKNFEESQEAMKQQLLQLSLLLKALDPELCDYLDSQDS
GSLCFCFRWLLIWYKREFSFEDILNLWEVLWTRLPCENVHLLMACAILESQRGELIGSNH
DFNTILKHINELNMKLDLQTVLQGAEGIYLQLAQCKELSVKVQEVLGLYVASSSEEGSPD
LEPKETDTLLSQAEARGASSCQTSSSYTASPRPPPTYP
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaaaatcgcaagctgatctttgagaaggagggggtttaccttcacacaaat
gccaagaggagtaaccaagacacaactattcctggattcatccgtattgtagagaaggat
ggagagtcagtattggagtggagccctgttcaggatgatgggaaaaacgcacctgctgtc
ttttatgccaaaaaggatggggaaggaggagaggaggaaaccaactttgacccggggtat
gagccagactgggccgttatcggcacagtgaagcagaaccgagaaaaagagaaaacaccc
gtcagagacacaggtcattggggctcgttctcgctgcctctgtcggagctgtactccctg
cgtcgtgctcgcttctctctgggcaggaacttcatggtgttgactagtcgagggggtgac
cccctacccccgctgcacttccaccggggcggcaccagagagctgttccgcgccatgcag
agatacatcagactcgtcccgtctcctgtggatggacgcctgttcctggcgtatcctcat
gactctggcgccctctcccagtcatttgatgagctgcagctctttgatgatggcagttca
gacctggtctcaaggttcattcaggacccctacgcaaccacatttgggggattctccaag
gtgacaaatttctttaggggggcactgagacccccagaatcaccactacactcccgctca
ccaccagaaccaaactcagcccacccacctgatgacgagccaggctttgagctcataacc
tgtggggcagagttgggaccccggccaaaggtgaccaggggccagcctctggataactgg
gagcagtttctcgacccggaggggcgcgtcacagatccacagaaagtcaaggaactggtg
ttcagagggggcatcattccatctctgcggaaagaggtgtggaaattccttctaggcttt
tatccctggaacagcacagccaaagagagggaggatattattcgggtgaaaacggatgag
tatttcaggatgaaggttcagtggaaatcggttagtgaagagcaagagatgagaaactcc
ctcctgagaggataccgcagtctcattgagcgggacgttaatcgcacagacagacaaaat
tccttcttctctggaaatgaaaacccgggcctgaagcttctccacgatgtactgatgacc
tactgcatgtacaactttgacctgggttatgtgcagggtatgagtgacctcctggcccct
cttctctttgtcacccagaatgaagtggagtccttttggtgtttgaccgggtttatggac
ctagtgcacaagaactttgaagagtcgcaggaggccatgaagcagcagcttcttcagctc
agccttttactgaaagcactggaccctgagctctgtgactacctggattctcaggacagt
ggatctctgtgtttctgcttccgctggctgctcatctggtataagagagagttttccttc
gaggacatcctgaacctttgggaggttctatggacacgtcttccttgtgaaaatgtccac
ctgctgatggcctgcgcaatcctggagtctcagaggggggagctgattggatcgaaccat
gattttaacacaatactgaagcatattaatgagctgaacatgaagctggatctgcagaca
gtgctgcagggggcagagggcatctacctgcagcttgcccagtgcaaggagctgtcggta
aaggtgcaggaggttctggggctgtacgtcgcgtccagctcagaggaggggagtccagat
ttagagcccaaagagacggacactctgctcagccaggccgaggccagaggagcatcgtcc
tgtcagaccagcagcagctatacagcatccccccgccccccaccaacctacccctaa
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