KEGG   Astyanax mexicanus (Mexican tetra): 103046242
Entry
103046242         CDS       T05042                                 
Symbol
rarga
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
  KO
K08529  retinoic acid receptor gamma
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amex03000]
    103046242 (rarga)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:amex03310]
    103046242 (rarga)
Transcription factors [BR:amex03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    103046242 (rarga)
Nuclear receptors [BR:amex03310]
 1. Thyroid hormone like
  1B. Retinoic acid receptor (RAR)
   103046242 (rarga)
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 103046242
NCBI-ProteinID: XP_022532804
Ensembl: ENSAMXG00000029553
LinkDB
Position
13:complement(1218847..1312381)
AA seq 502 aa
MATNRSHMPGFPPAVYPFAFNSMRSHSPFDLMANSSLFGRFGADLPKEMAALSVETQSTS
SEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRD
KNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEMVPVESYELSGELEE
LVNKVSKAHQETCPSLCQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEFAKRL
PGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLT
DLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPQRVDRLQEPLLEALKIYARRR
RPNKPHMFPRMLMKITDLRGISTKGAERAVTLKMEIPGPMPPLIREMLENPEAFEDQPES
GESKAEPPAPPPAPPLTMKTEREDEDDGWANENGSEPSPEEEDEDEDDVEEERGTDSDGD
AWSGQEPNVQDMSRKSHGGRAQ
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggcaaccaaccgcagccacatgcccggcttcccgcccgccgtctaccccttcgccttc
aactccatgcgcagccactcccccttcgacctgatggccaacagcagcctgttcgggcgc
tttggggcggaccttcccaaagagatggcggccctgtccgtggagactcagagcaccagc
tcagaggagatggttcccagctctccttctccacctccacctccccgagtctacaagccc
tgcttcgtgtgtcaggacaaatcctcaggctaccactacggggtcagctcctgcgagggc
tgcaagggcttctttcggcgcagcatccagaagaacatggtgtacacctgccaccgcgac
aagaactgccagatcaacaaggtcacgcgcaaccgctgccagtactgccgcctgcagaag
tgcttcgaggttggcatgtccaaggaagctgtgcggaacgaccgcaacaagaagaagaag
gacgtgaaggaggagatggtgccggtggagagctacgagctgagcggagagctggaggag
ctggtgaacaaagtgagcaaagcgcaccaggagacctgcccctcgctgtgccagctggga
aaatacaccacaaactccagctcggatcaccgtgtgcagctggatctgggattgtgggat
aagttcagtgagctctccacaaagtgcatcatcaaaatcgtagagttcgccaagcgtctc
cccggattcaccaccctcaccatcgccgaccagatcaccctcctcaaatccgcctgcctc
gacatcctgatgctgcggatctgcacgcgctacacacctgagcaggacaccatgaccttc
tcagacggattgaccttgaaccgcacgcagatgcacaacgcggggttcgggccgctcaca
gacctggtgttcgccttcgccgggcagctgctgccgctggagatggacgatacagaaaca
ggacttctcagcgccatctgtctgatctgtggagaccgtatggatctggaggagcctcag
cgtgtggaccgtctgcaggagcctctactggaggcactaaaaatttatgctcgccgccgc
cgacccaacaaaccccacatgttcccccgcatgctgatgaagatcactgacctgcggggc
atcagcaccaaaggagcggagagggcggtgactctgaagatggagattcccggccccatg
cctcctctaatccgagagatgctggagaatccggaggcgttcgaggaccagccggagtcc
ggcgagagcaaagccgagcccccggccccacctccggccccgcccctcaccatgaagaca
gagcgcgaggacgaggacgacggctgggccaacgagaacggcagcgaaccctcgccggag
gaggaggacgaggacgaggacgacgtggaggaggagagggggacggacagcgacggggac
gcctggagcggacaggaacccaacgtccaggacatgtccagaaagagccatggggggaga
gcccagtga

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