Astyanax mexicanus (Mexican tetra): 103046242
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Entry
103046242 CDS
T05042
Symbol
rarga
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103046242 (rarga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amex03310
]
103046242 (rarga)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
103046242 (rarga)
Nuclear receptors [BR:
amex03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
103046242 (rarga)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
103046242
NCBI-ProteinID:
XP_022532804
Ensembl:
ENSAMXG00000029553
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Position
13:complement(1218847..1312381)
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AA seq
502 aa
AA seq
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MATNRSHMPGFPPAVYPFAFNSMRSHSPFDLMANSSLFGRFGADLPKEMAALSVETQSTS
SEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRD
KNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEMVPVESYELSGELEE
LVNKVSKAHQETCPSLCQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEFAKRL
PGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLT
DLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPQRVDRLQEPLLEALKIYARRR
RPNKPHMFPRMLMKITDLRGISTKGAERAVTLKMEIPGPMPPLIREMLENPEAFEDQPES
GESKAEPPAPPPAPPLTMKTEREDEDDGWANENGSEPSPEEEDEDEDDVEEERGTDSDGD
AWSGQEPNVQDMSRKSHGGRAQ
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaccgcagccacatgcccggcttcccgcccgccgtctaccccttcgccttc
aactccatgcgcagccactcccccttcgacctgatggccaacagcagcctgttcgggcgc
tttggggcggaccttcccaaagagatggcggccctgtccgtggagactcagagcaccagc
tcagaggagatggttcccagctctccttctccacctccacctccccgagtctacaagccc
tgcttcgtgtgtcaggacaaatcctcaggctaccactacggggtcagctcctgcgagggc
tgcaagggcttctttcggcgcagcatccagaagaacatggtgtacacctgccaccgcgac
aagaactgccagatcaacaaggtcacgcgcaaccgctgccagtactgccgcctgcagaag
tgcttcgaggttggcatgtccaaggaagctgtgcggaacgaccgcaacaagaagaagaag
gacgtgaaggaggagatggtgccggtggagagctacgagctgagcggagagctggaggag
ctggtgaacaaagtgagcaaagcgcaccaggagacctgcccctcgctgtgccagctggga
aaatacaccacaaactccagctcggatcaccgtgtgcagctggatctgggattgtgggat
aagttcagtgagctctccacaaagtgcatcatcaaaatcgtagagttcgccaagcgtctc
cccggattcaccaccctcaccatcgccgaccagatcaccctcctcaaatccgcctgcctc
gacatcctgatgctgcggatctgcacgcgctacacacctgagcaggacaccatgaccttc
tcagacggattgaccttgaaccgcacgcagatgcacaacgcggggttcgggccgctcaca
gacctggtgttcgccttcgccgggcagctgctgccgctggagatggacgatacagaaaca
ggacttctcagcgccatctgtctgatctgtggagaccgtatggatctggaggagcctcag
cgtgtggaccgtctgcaggagcctctactggaggcactaaaaatttatgctcgccgccgc
cgacccaacaaaccccacatgttcccccgcatgctgatgaagatcactgacctgcggggc
atcagcaccaaaggagcggagagggcggtgactctgaagatggagattcccggccccatg
cctcctctaatccgagagatgctggagaatccggaggcgttcgaggaccagccggagtcc
ggcgagagcaaagccgagcccccggccccacctccggccccgcccctcaccatgaagaca
gagcgcgaggacgaggacgacggctgggccaacgagaacggcagcgaaccctcgccggag
gaggaggacgaggacgaggacgacgtggaggaggagagggggacggacagcgacggggac
gcctggagcggacaggaacccaacgtccaggacatgtccagaaagagccatggggggaga
gcccagtga
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