Astyanax mexicanus (Mexican tetra): 103046246
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Entry
103046246 CDS
T05042
Name
(RefSeq) semaphorin-6D-like
KO
K06842
semaphorin 6
Organism
amex
Astyanax mexicanus (Mexican tetra)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
103046246
NCBI-ProteinID:
XP_049329071
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MELLITAGLLSITAVATPFPKDLQPISTAGPEDSRLFPSFQGLVSDNDTQRLGLDYQRMI
RINRMLYIAARDHVFAVNLSASVNQVIPQQRLIWRSKDVGKCTVRGKNTDECYNYIKVLV
QRNDETLFTCGTNAFNPTCRNYRLSSLEQVGAELVGQARCPFESHQANVGIFASGHFYSA
TMSDFQASDAVIYRSLGGEGSPVLRSVKYDSKWLREPRFLHAIEYSSYVYFFFSEIAVEY
TTLGKVVYSRVARVCKNDSGGSARVLERYWTSFLKARLNCSIPGDSFFYFDVLQSVSGII
QINQRPAVVGVFTTQINSIPGSAVCGFYLDEMERVFQGRFKEQKGTDSAWSSVPEEQVPK
PRPGSCAGEGSASAFSSSALFPDSMLSFIKAHPLMDESVSSINNQPFLTQTTSSYKLSQI
VVDTVAGPNRNRTVMFLGSEDGHVQKILMNSDPNLSYSTTMLEDIHVYNPKTCKGDRRVL
GLELDKEHHALFVAFSSCIIRVPLSRCTKHRNCRSRCLSSRDPYCIWLKTGSCADLLPGF
KAGFEQDIDGKQTPSLDSCNDVISEAGNHNSETDSTLGVSNMSGVSASESSGVHYTLLMA
CVLVAFVCGAFLSALMVSCYCGQTPASDSQTKLSLAKLSDLLEPRAPGASQQIYCSFLSK
PSQQEVPGSTAAPPGGDQDTQQRSTVPTPETTPQLTNNKHHQNQTCSNNVPTQQVFPFTQ
NISDTQSGAELSLSNNQSASPSMSLSRSIHFQSPVDWQNQGTMAVADLDKYLQHLHQEIT
SCKSTEGDGIAAVSSASPTLPEATVPTCCSVPSFYSSYGSSSTILPQDHEPPVKSEPLQP
VEPVEPVESARPESLGRRPSQRLKLIKLGTGCAAVSRQHSYNQRRALQHRLVHISPDRNA
ASTKADQLGHGNGTDATDCRLLLPGGSCLTRQHSYSEQPHTQLHTQRAAIIRRTASLKPH
SPQTSPPRVFPPPTVPTGTRDTTDY
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgattacagccggcctgctgtccatcactgctgtagccacgccctttccc
aaagacctgcagccaatcagcacagccggacctgaagattcgcggttgtttcccagtttt
cagggtttggtgtcggataacgatacgcagcgtttgggactggactaccagcgcatgatc
cgaatcaaccgcatgctctacatcgcagccagggatcatgtatttgctgttaacctctcg
gcttcagtaaaccaggtcatccctcagcagagactgatctggagatctaaggatgtgggg
aaatgcaccgtcaggggtaaaaacaccgatgaatgttacaactacattaaagttttggtt
cagagaaacgacgagactctcttcacctgcgggacaaacgctttcaaccccacctgcaga
aactacaggctgtcgtctctggagcaggtgggggcggagcttgtgggacaggctcgctgt
ccgtttgagtcgcaccaggccaacgtgggaatattcgcaagtggtcatttctactcggct
acgatgtctgatttccaggcgagtgatgctgtgatttacaggagtttaggaggagagggg
agtccagtgttacgctccgttaaatacgactctaaatggctcagagagcctcgttttctg
cacgcgattgagtacagcagctacgtttacttcttcttcagtgagattgctgtggagtac
acaactctcgggaaggtagtgtactctcgtgtagcgcgagtgtgtaagaacgacagtggt
ggatcagctcgagtgttggagcggtactggacgtcgtttctaaaagctcggctgaactgt
tccattccgggagattccttcttctacttcgacgttttacaatcagtcagcggcatcata
cagatcaaccagcgccccgcagtggtgggagtgttcactacacagataaacagtattccg
ggttctgcagtgtgcgggttctacctggatgagatggagcgagtgtttcagggcagattt
aaggaacagaaaggaacagattcagcctggagttcagttccagaggagcaggtcccaaaa
ccacgtcccggctcctgtgcaggtgagggttcagcgtcagcgttctcttcttctgctctg
tttcccgactccatgctctccttcatcaaagctcacccactgatggacgaatcggtttcc
tccatcaacaaccagccgtttctcacgcagaccaccagcagctataagttatctcagata
gtcgtggacacggttgctggaccgaatagaaaccgtacggtgatgttcctgggttctgaa
gacggacatgttcagaagatcctgatgaattctgacccaaacctttcctacagcaccacc
atgctggaggatatacacgtgtataaccccaaaacgtgtaaaggagatcggagggttctg
ggtttagagctggataaggaacatcacgctctgttcgtagctttttccagctgcatcatc
agagttcctctcagccgctgcactaaacaccgaaactgcaggagtcgctgtctctcctcc
cgcgacccatactgcatctggctgaaaacaggaagttgtgcggacctgttaccaggattt
aaagcaggatttgagcaggatatcgacggtaaacaaacaccatccctggactcctgtaac
gatgtaatttcagaggcaggaaatcataactcagaaactgattcaacacttggtgtgtcg
aacatgtcgggagtctctgcatctgagagctcaggtgttcactacacgctgctgatggcg
tgtgtgctggtggcgtttgtttgcggcgcgtttctctctgcactgatggtttcctgttac
tgcggccagacgccggcgtcggactcgcagaccaaactcagcctggccaaactgagcgac
ctgctggagcctcgagcccccggagcctcccagcagatctactgctccttcctgtccaaa
ccctcacaacaggaagtgcccggctccaccgcggcgccccctggaggagaccaggacacg
cagcaacgttccaccgtgcctacgcccgagactaccccacaactaaccaacaacaaacac
catcaaaaccagacctgcagcaacaacgttccaacccagcaagtcttccctttcactcag
aacatcagcgatacccaatcaggagctgaactgtctctttccaacaaccaatcagcttcc
ccgtccatgtccctgtcacgttcgatccatttccagtctccagttgattggcaaaatcaa
ggtacaatggcggttgcagatctggacaagtatctccaacacttgcatcaggagattacc
agctgcaaatccacggaaggagacggaatagctgctgtgtcctcagcatccccgacgcta
ccagaagctaccgtccccacgtgctgttcggtcccttctttttacagttcttacggttca
tcatcaacaattcttccgcaagaccacgaacctccggtaaagtccgaaccattacaaccg
gtggaacctgtagaaccagtagaatcagcgcgtccggagagcctcggacggcgtccctct
cagcggctaaagctaataaaactgggcaccggctgtgctgccgtgtcccgccagcacagc
tacaaccagcggagggcgctgcagcacaggctggtgcacatcagccctgacaggaacgcc
gccagtaccaaagcagaccagctgggccacggtaacgggactgatgccacggactgcagg
ctgctgcttcccggcggttcgtgtctcacgcggcaacacagctacagcgaacagccgcac
acgcaactgcacacgcagcgcgccgccatcatacgccgaacagcgtcactgaaaccacac
tcaccacagaccagcccacccagagtgttcccgccccctaccgtccccacaggaacacgc
gacaccaccgactactga
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