Astyanax mexicanus (Mexican tetra): 103046247
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Entry
103046247 CDS
T05042
Symbol
rxrab
Name
(RefSeq) retinoic acid receptor RXR-alpha-B
KO
K08524
retinoid X receptor alpha
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03320
PPAR signaling pathway
amex04148
Efferocytosis
amex04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103046247 (rxrab)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
103046247 (rxrab)
03320 PPAR signaling pathway
103046247 (rxrab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103046247 (rxrab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amex03310
]
103046247 (rxrab)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
103046247 (rxrab)
Nuclear receptors [BR:
amex03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
103046247 (rxrab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
103046247
NCBI-ProteinID:
XP_007243934
Ensembl:
ENSAMXG00000007750
UniProt:
A0A8B9J8H5
W5KK52
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All DBs
Position
22:27397276..27501724
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AA seq
501 aa
AA seq
DB search
METKPFLSLGLLKNPCAAPPPCLRGSSPPGCSCFTGMCPLHQRRISTDSSGQLSSSPLSS
PTGHRGMGPHPLHPSLLTPSSMGSTPGHLHSPINGLASPFPVISSPMGHPSMTGPSSTSM
AFGPSLSPQLSSPMISVSSPEDIKPPLGLNGVMKVPAQPTGTSLSFTKHICAICGDRSSG
KHYGVYSCEGCKGFFKRTVRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLATGMKREA
VQEERQRAKERSEAELELAGSSEDMPVEKILDAELAVEPKTETYVEGSPGAPANSGSLSP
NDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSISVK
DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKSELGCLRAIVLFNPDSK
GLSNPAEVEALRERVYASLEAYCKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQNT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaagccgttcctgtctctcgggctcctgaaaaacccatgtgctgcaccgccg
ccatgtctgcggggcagctcaccccctggctgctcctgcttcactggcatgtgcccgctt
caccagcgcaggatatccacagattcctcaggccagctctcgtcctctcctctcagctct
ccaactggtcatcgaggcatgggccctcaccctctgcacccgtccctgctcacaccgtcc
tctatgggctccaccccgggtcacctccactcacccatcaacggcctggcctcgcccttt
cccgtcatcagttcccccatgggtcatccatccatgaccggaccctcctccaccagcatg
gccttcggacccagtctcagtccacagctcagctcccccatgatttcagtcagcagccca
gaagacataaaacctcctctgggtctgaacggggtcatgaaggttcctgcccaaccaacc
ggcacctcgctgtctttcaccaaacacatctgcgccatctgcggtgaccgctcctcaggt
aaacactatggggtttacagctgcgagggctgcaaaggcttcttcaagcggacggtgagg
aaagacctgatctacacctgcagagacaacaaggactgtctaatcgacaagcgccagcgc
aaccgctgccagtactgccgctaccagaaatgtctggccacgggcatgaagagagaagct
gttcaggaggagaggcagcgggcgaaagagaggagcgaggctgagctggagctggccggc
tccagtgaggacatgccggtggagaagattctggatgctgagctggcagtggagcccaaa
acagaaacctatgtggagggcagccccggtgctccagccaactctggaagcctctctccc
aacgaccccgtcacgaacatctgccaagctgcggataaacagctctttacgttagtggag
tgggccaaaaggataccacacttttctgacctccctctagacgaccaagtcattctttta
cgagcaggctggaacgagctcctcatcgcttctttctcacaccgctcaataagtgtgaag
gatggcatattgttagcaacagggctccacgtccatagaaacagtgcacacagtgcggga
gtaggagccatctttgacagagtgctgacggagttggtgtctaagatgcgagacatgcag
atggacaagtctgagcttgggtgcctgcgagcaattgttcttttcaatccagactctaag
ggcctgtcgaacccagcagaggtggaggcgctgagggagagagtctacgcttcactggag
gcctactgtaaacagaaatatccagaccaacccgggagatttgccaaactgctactccgg
ctgcctgctctgcgatccatcggcctgaagtgtctggagcacctgtttttcttcaaactt
attggagacacacccatcgacactttcttaatggaaatgctggaggcgccgcaccaaaat
acataa
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