Astyanax mexicanus (Mexican tetra): 103046314
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Entry
103046314 CDS
T05042
Symbol
trim3a
Name
(RefSeq) tripartite motif-containing protein 3
KO
K11997
tripartite motif-containing protein 2/3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103046314 (trim3a)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103046314 (trim3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
SGL
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-C3HC4_2
TEN_NHL
zf-RING_2
Invasin_D3
RING_XB3-XBAT31
zf-C3HC4_4
Mala_s_1-like
EF-G-binding_N
zf-ANAPC11
Prok-RING_4
Baculo_PEP_C
ATG17_like
CRLF3_N
DUF7260
DUF6455
FTR1_4HB
Apolipoprotein
Histidinol_dh
FapA
DUF7605
DUF8567
Muted
Motif
Other DBs
NCBI-GeneID:
103046314
NCBI-ProteinID:
XP_022524518
Ensembl:
ENSAMXG00000012536
LinkDB
All DBs
Position
18
Genome browser
AA seq
773 aa
AA seq
DB search
MPLTMAKRETGSTSPVVRQIDKQFLVCSICLEHYHNPKVLPCLHTFCERCLQNYIPPQSL
TLSCPVCRQTSILPEKGVAALQNNFFITNLMEVLQRESECSQPESCNVLETASAATSAQP
LSCPNHEGKVMEFYCESCETAMCLECTEGEHREHVTVPLRDVLEQHKAALKNQLDAIRNR
LPQLTSAIDTVNDISKQLAERKSEAITEISSTFEELERSLHQRKNALITDLENICSTKQK
VLQSQLSALLQGKENIQSSCSFTEQALNHGSATEVLLVQKQMGERMGALERHAFPEQPHE
NGHLQCQVETEGLRRSIQNLGVLLTTSAVGHTSVATGEGLRHAVVGQLTTVTVTTKDKGG
ELVKTGNAALKAQISGVDGSVLGAEVSDNKNGTYDVGYTLRSEGEFSFSLLLYGQPVRGS
PFRLRAVKPCDAPQSPDDVKRRVKSPGGGGGGGHVRQKAVRRPSSMYSTTKKKENPIEDE
LIYRVGTRGRERGEFSNLQGISTSSNGRIVVADSNNQCIQVFSNDGQFKLRFGVRGRSPG
QLQRPTGVTVDMNGDIIVADYDNRWITIFSSDGKFKSKIGAGRLMGPKGVAVDKNGHIIA
ADNKACCVFIFQSNGKLVTKFGAKGTSDRQFSDKSAPNTPVEQKLSKSGPAFSPHFVAVN
NKNEIVVTDFHNHSVKVYNADGEFLFKFGSHGEGNGQFNAPTGVAVDGNGNIIVADWGNS
RIQVFDSSGSFLSYINTTADPLYGPQGLALTSDGHVAVADSGNHCFKVYRYLQ
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcaccatggctaagcgtgagaccggcagcaccagtcccgtggtgcggcagata
gataagcagttcctggtctgcagcatctgcctggagcactaccacaaccctaaagtcctg
ccctgcctgcacaccttctgtgaacgatgcctccagaactacatccccccgcagtctctg
accctgtcctgcccggtgtgccggcagacctccatcctgccggagaagggcgtggcggcg
ctgcagaacaacttcttcatcactaatctgatggaggtcctgcagagggagtcggagtgc
tcccagcccgagtcctgtaacgtcctggagacggccagcgccgccacctccgcccagccc
ctctcctgtcccaaccacgagggcaaggtgatggagttttactgtgagtcgtgtgaaacg
gcgatgtgtttggagtgtacggagggggaacaccgggagcacgtgaccgttcctctccgg
gacgtcctggagcagcacaaagcagcgctcaaaaaccagctggacgccattcggaacagg
cttcctcagctgacctcagcgatcgacacagtgaatgatatctctaagcagttggcagag
aggaagagtgaagcgatcactgagatcagcagcaccttcgaggagctggagcgatcgctg
caccagcgcaagaacgctctcatcactgacctggagaacatctgcagcactaagcagaag
gttctgcagtctcagctgtctgcactgcttcaggggaaggagaacatccagagcagctgc
agcttcaccgagcaggccctgaaccacggcagcgccaccgaggtcctgctggtgcagaag
cagatgggcgagaggatgggggcgctagagcgccacgccttccccgagcaaccgcacgag
aacggccacctgcagtgccaggtggagacggaggggctgagacgatccattcagaacctg
ggggtcctgctgaccaccagcgccgtggggcacaccagcgtggccacgggggaggggctg
cggcacgctgtggtgggacagctcactaccgtcaccgttacaacgaaggataaaggtgga
gagctggtaaagacggggaacgcagcgctgaaagctcagatctccggtgtggacgggtca
gttctgggcgcggaggtgtcggataataagaacgggacgtatgatgtggggtacacgctg
aggagcgagggggagttctccttctctctgctgctgtacggacagcccgtacggggcagc
cccttccgcctgcgggccgttaaaccctgcgacgccccgcagtctccggacgacgtaaag
cggcgcgtgaagtcccccggcggaggaggaggcggaggacacgtccggcagaaagccgtg
cgccggccctccagcatgtacagcaccaccaagaagaaggagaaccccatcgaggacgag
ctgatctacagagtggggacgagaggacgagaacgaggagagttctctaacctgcagggc
atctccacctccagtaacggccgcatcgtggtggccgacagtaataatcagtgtatacag
gttttctctaatgacggtcagtttaagctgaggtttggggtcagaggtcgttctccaggg
cagctgcagcgtcccaccggcgtgacggtggacatgaacggggacatcatcgttgcggat
tacgataaccggtggatcacgatcttctcctctgacgggaaatttaagagtaaaattgga
gcggggcgactgatggggcctaaaggagtcgcggtggataaaaacgggcacattatcgct
gcagataataaagcctgctgcgtctttatcttccagtccaacgggaaactcgtaactaaa
ttcggagcgaagggaacgtcagacagacagttctcagacaaaagtgccccaaacactcca
gtggagcaaaagctcagtaaatccggccctgccttcagtcctcattttgtggccgtgaac
aacaagaatgaaatagtcgtgactgatttccataatcattctgtaaaggtgtataatgcg
gacggggagttcctgtttaagttcggttctcacggggagggaaacgggcagtttaacgct
ccgacgggcgtggccgtggacggcaatggaaacatcattgttgcagactggggtaacagt
aggatacaggtgttcgacagctcaggatccttcctgtcgtacatcaacacgacggcggac
cctctgtacggccctcagggtctggctctcacgtccgacggtcacgtggccgtggccgac
tctggaaaccactgttttaaagtctaccgttacctgcagtag
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