Astyanax mexicanus (Mexican tetra): 103046430
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Entry
103046430 CDS
T05042
Symbol
trim2b
Name
(RefSeq) tripartite motif-containing protein 2
KO
K11997
tripartite motif-containing protein 2/3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103046430 (trim2b)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103046430 (trim2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
TEN_NHL
zf-B_box_ZFPL1
Ig_GEX2_N
Beta-prop_IFT122_1st
Mala_s_1-like
ANCHR-like_BBOX
Fzo_mitofusin
YtkA
DUF7605
Motif
Other DBs
NCBI-GeneID:
103046430
NCBI-ProteinID:
XP_022519991
Ensembl:
ENSAMXG00000018075
LinkDB
All DBs
Position
21
Genome browser
AA seq
668 aa
AA seq
DB search
MEAQQGSPDSSSEECTVLEALPGKGTGLICAQHKGKVVALYCLPCESAVCEDCVVGQHMD
HPTESLEEIVDQQRTALQERLDAATNRLPQIREAARSLREILQQLSVQKNSIEEDIHYSF
SELHKTLDTRKSVLLMELEVTYGLKQKVLQAQLDTLLKEEVAINSNCRITGDALDAESEA
AVLQTHKTVGEKLSALASQGLPLQPEENDQLELMMEVEGLRKSIHNLGAIITTNAVASQT
EAAGEGLEQCVVGQPASVIITTKDKSGGVCKTGNAIISAEVFTPNGSVTDGEILDHKNGT
YEFQYTLHKEGDFSLALRLYDQHIKGSPFRLKVTSSPDDSPPTTSGANAASTGSSDGGAR
RRSAKSPGSRSRQKGVRRGGSLFSTPKKKVNPIEDDLIFRIGTKGRNKGEFTNLQGVAAS
PESILIADSNNQCVQIFSNQGEFQSRFGVRGRSPGQLQRPTGVAVHPNGDIIIADYDNKW
VSIFTSDGKYKAKLGSGRLMGPKGVSVDQNGHVIVVDNKACMVFIFQPSGKLVTKFGSRG
NGDKQFAGPHFAAVNNNNEIIVTDFHNHSVKVFSAEGEFLLKFGSNGEGNGQFNAPTGVA
VDVNGNIIVADWGNSRIQVFDGSGSFLSYINTAADPLYGPQGLALTSDGHVVVADSGNHC
FKVYRYLQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcagcaaggttctcctgacagcagcagtgaggagtgtactgtacttgaggct
ctgcctggcaaaggaactggactaatttgtgctcaacacaaaggaaaagttgtggctctg
tactgtttgccatgtgaaagtgctgtgtgtgaggactgtgttgtcgggcagcatatggac
caccccaccgaatccctggaggaaattgtggatcaacagcgaactgctttacaggaaaga
ctggatgcagctacaaacaggctaccccagataagagaggcagcgcgttcgctgagggag
atcctgcagcagctgagtgttcagaagaactcaatagaggaggacatccactactccttt
agtgaactacacaagaccctagatacgcgaaagagtgtcctgctcatggagctggaggtc
acctacggattgaagcagaaggtcttacaggctcagttagacactctgctaaaagaggag
gttgccattaacagtaactgcagaataacaggagacgctctggatgcagaaagtgaggct
gctgttttgcagactcataaaactgttggtgagaaactgagtgcgctggccagccagggc
cttcccctgcagcccgaggagaacgaccagctggagctcatgatggaggttgaaggactg
cgtaagtccattcataacctgggggccatcatcaccactaacgccgtggccagccagacg
gaggctgctggagaaggtttggagcagtgtgttgtgggccagcctgcctccgtcatcata
accaccaaggacaagtctgggggcgtgtgcaagacgggcaatgctatcatctcagcagaa
gtcttcacgcccaatggcagcgtcacagacggggaaatcctggaccacaagaacggaacc
tacgagttccagtacactttgcacaaggagggggactttagcctggctctgagactgtat
gaccagcacatcaaaggaagcccgttcagattaaaggtgaccagctctcctgacgattct
ccccccaccacctcaggagctaatgctgcctcaacaggttccagtgatggaggagcaaga
agacgcagcgcaaagtccccagggagcaggagtcgacagaagggggttcggagaggagga
agcttgttcagcaccccgaagaagaaggtcaaccctattgaagatgacctcatctttaga
atcggaactaaagggcggaataaaggggagttcactaatctacagggtgtagcagcttct
ccagaaagtatcctgattgcagacagtaataatcagtgtgtgcagatcttctccaaccag
ggagagtttcagagccggtttggtgttcgtggacgttcaccaggacaactgcagcggccc
actggtgtagctgtccatcctaatggtgacatcatcatcgctgactatgataacaagtgg
gttagcatcttcaccagtgatggaaaatacaaggcgaagttgggttctggcagactgatg
ggtccgaagggcgtgtctgtggatcagaatggtcacgttattgtcgtggacaacaaggcc
tgcatggtgtttatcttccagcccagtggaaaactagtaacaaagtttggcagcagaggc
aacggagacaagcagtttgcaggtcctcactttgcagcagtcaacaataataatgaaatt
attgtcacagactttcataatcactcagtaaaggtgttcagtgcagaaggagagttctta
ctaaagtttggctcgaatggtgagggaaacgggcagttcaacgcccctaccggcgtagcg
gtggacgttaatgggaatatcattgtagcggactggggaaatagccgcatacaggtattt
gatggaagcggctcgtttctatcctatattaacacggccgctgatccactttatgggccg
caaggtctcgccctgacgtctgacggccatgttgtggtggctgactctgggaatcattgt
ttcaaagtgtaccgttaccttcagtga
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