KEGG   Astyanax mexicanus (Mexican tetra): 103046474
Entry
103046474         CDS       T05042                                 
Symbol
zmat5
Name
(RefSeq) zinc finger matrin-type protein 5
  KO
K13152  U11/U12 small nuclear ribonucleoprotein 20 kDa protein
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amex03041]
    103046474 (zmat5)
Spliceosome [BR:amex03041]
 Other splicing related proteins
  Minor spliceosome components
   Minor spliceosome specific factors
    103046474 (zmat5)
SSDB
Motif
Pfam: zf-U1 zf-CCCH_4 zf-CCCH zf_CCCH_4 zf-CCCH_9 zf-CCCH_2 zf-C2H2_2 Glyco_hydro_42
Other DBs
NCBI-GeneID: 103046474
NCBI-ProteinID: XP_015456260
Ensembl: ENSAMXG00000006979
UniProt: A0A8B9GK36 W5KHV8
LinkDB
Position
1:complement(18329232..18333282)
AA seq 172 aa
MGKRYYCDYCDRSFQDTLHNRKKHLNGVQHQRAKKAWLDNFRDTAAILQDERAKPPCRKF
LQTGACVFGHNCLYSHLSEMDIKALEQQIEEEKWQKMMPGDKHSEPSVEEWLSRREKKKA
AMTSGSVLKMEEEEAAENSDVPLFLRSIPDLPPSLLPPHPGGWRASVHSDWG
NT seq 519 nt   +upstreamnt  +downstreamnt
atggggaaacggtattattgtgattactgtgaccgtagctttcaggatacactgcacaac
aggaagaaacacctaaacggagttcagcaccaaagagctaagaaagcctggctggataac
ttcagagatactgctgcaattctacaagatgagagagcaaagccaccatgcaggaagttt
ctgcagacaggcgcatgtgtgtttggccataactgcctgtattcacatttgtctgaaatg
gacataaaggctttggaacaacagattgaagaggaaaaatggcagaagatgatgcccggt
gataaacactctgaaccttcagtggaggagtggctttccagaagagaaaagaaaaaggct
gccatgacatcaggaagtgttttaaaaatggaggaggaagaagcagctgagaatagtgat
gtgccattatttttgcgatccatccctgatctgccaccatcacttcttcctccacaccct
ggaggatggagagcgagcgtccacagtgactggggttga

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