Astyanax mexicanus (Mexican tetra): 103046587
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Entry
103046587 CDS
T05042
Symbol
si:ch211-241b2.5
Name
(RefSeq) selection and upkeep of intraepithelial T-cells protein 5
KO
K06745
programmed cell death 1 ligand 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
103046587 (si:ch211-241b2.5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
amex04090
]
103046587 (si:ch211-241b2.5)
CD molecules [BR:
amex04090
]
Proteins
103046587 (si:ch211-241b2.5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
NACHT
ig
V-set
Ig_2
C2-set_3
I-set
C1-set
C2-set_2
AAA_25
AAA_16
Sema4F_C
DUF815
nSTAND3
PepSY_TM
AAA_30
AAA_29
Motif
Other DBs
NCBI-GeneID:
103046587
NCBI-ProteinID:
XP_022532401
LinkDB
All DBs
Position
17:47137321..47159243
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AA seq
501 aa
AA seq
DB search
MKRTVFIFLLAITWPSTQALFTVTSEQDSYDGELHKKITMGCRFSPVEKSQISQLSVIWQ
RVEPLPVMEVYRLEKGVEIRNVTDGQFQNRAQLLKDELKKFRAVLELFPLQISDSGTYQC
IVKHKEADYKKTTLTVRAPYRPVRKNIRRLNNEEVELSCESQGFPLAHVDWSEEELTRRM
NNTSEKTSEGTYKLTSRVTVTGNVIKNYTCSFMEEKKTGPSATFNIPGEIPVRSNWSHGY
AAVGVISVMCLGFAVTSLILHWRRKGQKNKGSMSTVCITSEPNLTVTSADFLIPKKDAKP
DSFSVSSEVCGEKVEKLREVLMKRYAELDTSELRSGFTLICGEGQFSHLQPLIPGPKQTV
LLEGREGSGKSSVSRTLASSWAKNVSSGPVSLSGIRLVILVNFEGADGDFFQVVRSNIPS
EADLETADVKNILLGNTDSLLLLDGYRKGDREVDETLVKFLKERSSSRVLITARPGQLSS
AGEVITRIFQLHTENTQTENS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaacagtattcatctttctactggccatcacatggccttcaactcaggccctc
ttcacggtgacgtctgagcaggattcctatgatggtgaactgcacaaaaagatcacaatg
ggctgtcggttctcacctgttgaaaaatctcaaatctctcagctgtcagtcatctggcag
cgtgtcgagcccttaccagtcatggaggtatatcggttggagaagggcgtagagatccga
aacgtcaccgacggacagtttcagaaccgagcacagcttctaaaggacgagctgaagaag
tttcgggctgttctggagcttttccctcttcagatcagcgactccggcacgtatcagtgc
atcgttaaacacaaggaggcagactacaagaagacgactctaacagtacgagctccctac
cgtcctgttagaaaaaacatcagacggctgaataacgaagaggtggagctttcctgcgag
tctcaaggcttcccattggctcatgtggactggagtgaggaagagctgactagacggatg
aacaacacctctgaaaagactagcgagggcacttataaactcaccagccgggtgactgtc
acggggaacgttattaaaaactacacttgctcttttatggaggagaagaaaactggtcca
tcagccactttcaacattccaggtgaaattccagtgaggagtaattggtcacatggttac
gctgccgtaggcgtcatctccgtgatgtgtttgggttttgctgttacctcactgatcctg
cactggaggaggaaaggtcaaaagaataaaggctcgatgtcgactgtgtgcataacatca
gaacccaatctgaccgtaacgtcagcggacttcttaattccaaagaaagatgccaaacct
gattcatttagcgtttcatcagaagtgtgtggtgagaaagtggagaagctgagggaggtt
ctgatgaagagatatgctgaactcgacacctcagagctgaggagtgggttcacactgatc
tgcggagaagggcagttcagtcatctccagccgctaatccccggcccaaagcagaccgtc
ctcctggaaggaagagaaggaagcgggaaatcatctgtctctcgaaccctggcttcgtcc
tgggcgaagaacgtcagctccggccccgtcagcctcagcgggatccgactggtgatttta
gtgaactttgagggagcggacggtgatttcttccaagttgtgaggtcaaacattccaagt
gaagctgatctggagacagcggacgttaaaaacattctcctggggaacacggacagtctc
ctccttctggacggctatagaaaaggggacagagaggtggacgagacgctggttaagttc
ttaaaggagcgaagcagcagcagggtgctgatcacagcccggcccggtcagctcagcagt
gcgggggaggtgatcaccagaatctttcagcttcacacagaaaacacacagactgaaaac
agctga
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