Astyanax mexicanus (Mexican tetra): 103046600
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Entry
103046600 CDS
T05042
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04136
Autophagy - other
amex04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103046600 (wipi1)
04136 Autophagy - other
103046600 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103046600 (wipi1)
03029 Mitochondrial biogenesis [BR:
amex03029
]
103046600 (wipi1)
Membrane trafficking [BR:
amex04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
103046600 (wipi1)
Mitochondrial biogenesis [BR:
amex03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103046600 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
BCAS3_WD40
WDR55
Beta-prop_Vps41
EIF3I
RMC1_N
Motif
Other DBs
NCBI-GeneID:
103046600
NCBI-ProteinID:
XP_007233800
Ensembl:
ENSAMXG00000041671
UniProt:
A0A8B9HCG1
LinkDB
All DBs
Position
19:14326851..14347233
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AA seq
446 aa
AA seq
DB search
MEGEDGAGGACRPGLGCASFNQDSTSLAVGTKTGYRLFSVTAVDRLECIHESAESPDVYI
VERLFSSSLVVVVSQAMPRRMNVYHFKKGTEICNYSYSNTILAVRLNRQRLVVCLEESIY
IHNIKDMKLLKTLLNTPPNPSGLCALSINHSNSYLAYPGSATIGEIIVYDANNLNTVTMI
PAHDSPLAAITFNASGTKLASASERGTVIRVFSIPEGLRLFEFRRGMKRYVNISSLSFSP
DAQFLCASSNTETVHIFKLEQHGPSGEEETPTWSAYVGKMFTAASSYLPSQVSGMMSQDR
AFATVRLHTAGQKNVCTLATIQKLPRLLVASSDEQLFIYNIDPQDGGECTLVQMHRLLVS
DEEREEAAVSEGPGVPQSYAATAAIPTSAPVSATLTGYSEDGGVSRGEVIPEHEFAAGPV
CLDDETEFPPINRCRDGSRRDKSRRP
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggagggggaagacggtgctggtggggcttgcaggcccgggctgggctgcgcctccttc
aaccaggactccacgtctttggctgtgggcaccaaaaccggatacaggctgttctcagtg
accgctgtggacagactggagtgtatccatgagagtgcagaaagtccagacgtttatatc
gtggagcggctgttctccagcagtctggtggtggtggtgagccaggccatgcctcgccgc
atgaatgtctaccactttaagaaaggcaccgaaatctgtaactacagctactcaaacacc
atcctcgccgtgcgcctcaaccgacagaggttggttgtttgtctggaagaatccatctac
atccacaacataaaggacatgaagcttctaaagactcttctgaacacaccaccaaacccc
tcaggtctctgtgctctctccattaaccattccaactcgtacctggcatatcctggcagc
gccaccatcggagaaatcattgtctatgacgccaacaatctgaacacggtcaccatgatc
cccgcacacgacagcccactagcagccatcacctttaacgcctcaggaaccaaactcgcc
agcgcctccgagaggggcactgtgattcgagtgttctccattcccgaagggctgcgtctg
tttgaatttcgcagaggaatgaagaggtatgtgaacattagctccctgtccttcagccct
gatgctcagttcctgtgcgcctccagcaacacagagacagtgcacatcttcaaactggag
cagcacggcccgagtggtgaggaggaaacccctacctggtcggcatatgtgggaaagatg
ttcacagcggccagcagctacctcccatcacaggtttccggaatgatgagtcaggaccga
gcattcgccacagtccgcctgcacacagctggacagaaaaacgtctgtacacttgcaaca
atccaaaagcttccacgactgcttgtggcctcgtctgacgagcagctctttatctataac
atcgaccctcaggacgggggtgaatgcacactggtccagatgcacaggttgttggtgtca
gatgaggagagagaggaggctgctgtttctgagggtccgggtgttccacagtcctatgct
gccactgccgccatccccacatctgcacccgtatctgccactctaacaggttactctgag
gacggcggcgtcagtaggggcgaggtgattccagagcacgagtttgcagctggacccgtt
tgtctggacgacgaaacggagtttcctccaataaatcggtgtcgtgacggatctcggcgg
gacaaaagcagacgtccgtga
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