Astyanax mexicanus (Mexican tetra): 103046931
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Entry
103046931 CDS
T05042
Symbol
nefma
Name
(RefSeq) neurofilament, medium polypeptide a
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amex04812
]
103046931 (nefma)
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
103046931 (nefma)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF1664
Motif
Other DBs
NCBI-GeneID:
103046931
NCBI-ProteinID:
XP_022522230
Ensembl:
ENSAMXG00000040032
LinkDB
All DBs
Position
17:complement(2525820..2531749)
Genome browser
AA seq
913 aa
AA seq
DB search
MSFSVDSIGSPFRRTMDTRTSYSRSSGVGTPSSGFRSQTASWSRASPVSSSASVYKRGVN
VPVPAAARAYSSVVLSSVSDSADLSAVDPDYNKRANEKEQLQGLNDRFAVYIDKVHYLEQ
QNRQIEDEIHALRQKQVSQSQLGELYERELGELRAALETAHRERAQVQLDTERAEEDAQR
LRERLDDEARARDEAEAAARSLRRDAGDAALARQELEKKVRSLQDEVAFVRGNHEEEVGE
LLVQVQEATHAAADKREHSRADLTEALRDIRAQLEGHSAHNLQQVEDWFVGRYAKLTEAA
EQNKDAIRSARDEIADYRRQLQAKTVELEAVRGTKDSLERQLTDVEERHCSDLGGLQETI
HQLDNELKSTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYRQSVSK
GPKVKSEPPKLRVQHKFVEEIIEETRVEDEKSELDEALAEMAEELAAEKQEDEGEEEAEG
EEEAEEEGKEDEGEAEAEEGEGEGEGEGEAEAEEEEEVVASTQAKKVSASAPADEAEEAE
EGEKKGGDDEEEEAAAEEGEEEKGDDEEGEEGEGEKEEEGEEAEEGEDKDGEQEEEAEEK
VSSAKAPESKAVPEKEKEEEKAGEEASGGEEEGGEEEEEAEEKEEAVTEDKAEPEKKGED
KKAKEEVEKEDKKGKEEAKSEKDKATVTSDSPKAESPKAESPKAESPKAESPKAESPKAE
SPKAESPKAESPKAGSPKSEKPKEAPKTEAPKAEETKKEAPKSESPKKEEPKAEPPKKET
AKTEPPKATEPAEKASKKTEAPAEPEEKKADKKDAPSDKADKESKKEADDKKDVISNGVD
ESPTKDDSSQKVVITKTVETITTGEDGAKHVTKSVTVTETVKEVDEVVQEKLVATKKVEK
VSTQSVKQVTETE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctccgtagactctataggaagcccgttccggaggacgatggatacgcggacg
agctacagccgcagcagcggcgtcgggacgcccagcagcggcttccgctctcagaccgcc
tcctggtcccgggccagccccgtgtcttcctccgcctccgtctacaagcgcggcgtgaac
gtgccggtgccggcggcggcgcgcgcctacagctccgtggtgctgagcagcgtgtccgac
agcgcggacctgagcgcggtggaccccgactacaacaagcgcgccaacgagaaggagcag
ctgcagggtctgaacgaccgcttcgccgtgtacatcgacaaggtgcactacctggagcag
cagaaccggcagatcgaggacgagatccacgcgctgcgccagaagcaggtgtcgcagtcg
cagctgggcgagctgtacgagcgcgagctgggcgagctgcgcgccgcgcttgagaccgcg
caccgcgagcgggctcaggtgcagctggacacggagcgcgccgaggaggacgcgcagcgg
ctgcgtgagcgcctggacgacgaggcgcgcgcgcgcgacgaggccgaggcggcggcgcgt
tctctgaggcgcgacgcgggcgacgcggcgctcgcgcgccaggagctggagaagaaggtg
cgctcgctgcaggatgaggtggcgttcgtgcgcggcaaccacgaggaggaggtgggcgag
ctgctcgtgcaggtgcaggaggccacgcacgccgccgccgacaagcgcgagcacagccgc
gccgacctgaccgaggcgctgcgcgatatccgcgcgcagctcgagggccactcagcgcac
aacctgcagcaggtggaggactggttcgtgggccgctacgccaagctgaccgaggctgcc
gagcagaacaaggacgccatacggagcgcgcgcgacgagatcgcggactaccggcgccag
ctgcaggccaagaccgtggagctggaggccgtgcgcggcaccaaggactcgctggagagg
cagctgaccgacgtggaggagaggcactgctccgacctgggcggactacaggaaaccatc
caccagctggataacgagctgaagagcacgaaatgggagatggctcgacacctacgcgaa
taccaagaccttctcaatgtcaaaatggcgttagacattgagattgcagcatacaggaaa
ctccttgaaggagaggaaacccacttcagcaccttcccttaccgccagtccgtcagcaaa
ggccccaaggtcaaatccgaaccccccaagctgagggtgcagcacaagttcgtggaggag
atcatcgaggagaccagagtggaggacgagaaatcagagctggacgaggccctggcagag
atggcggaagagcttgctgcagaaaagcaagaggatgagggagaagaggaagcagaaggt
gaagaagaagctgaagaagagggaaaagaagacgagggagaggcagaggcagaagagggc
gaaggtgaaggtgaaggcgaaggtgaagcagaagcagaagaggaagaagaagttgtcgct
tcaacccaagccaaaaaagtgagcgccagtgctcccgcagatgaagccgaggaagccgaa
gagggagagaagaaaggaggtgatgacgaggaagaagaagcagcagcagaagaaggtgag
gaagaaaaaggagacgatgaagaaggagaggaaggagagggagagaaagaagaagaaggt
gaggaagctgaggaaggtgaggacaaagacggagagcaagaagaggaagctgaggagaag
gtttcaagcgctaaggcacccgaatcaaaagccgtgccagagaaagagaaggaggaggag
aaggctggagaggaggccagcggtggagaagaggaaggaggagaggaagaagaggaggct
gaggagaaagaggaagctgtgacggaggacaaagcagaaccagagaaaaagggcgaggac
aaaaaggccaaggaagaagtcgagaaagaggacaagaaaggaaaagaagaggccaagagc
gagaaagacaaagccactgtgaccagtgattcccctaaagcagaatctcctaaagcagaa
tctcctaaagcagagtctcctaaagcagaatctcccaaagcagaatctcctaaagcagaa
tctcctaaagcagaatctcccaaggcagaatcaccaaaggctggctctccaaagagcgaa
aaacctaaagaggcacccaagacagaagctccaaaagcagaagagacaaagaaagaagct
cccaagagcgaaagtcccaagaaggaagagcccaaagcagagcctcccaagaaagaaact
gcaaagacagaaccaccaaaagccaccgaaccagctgagaaggccagcaaaaagaccgag
gcgcctgcagagcctgaagaaaagaaggcggacaagaaagacgctccttccgacaaagcc
gacaaagaaagcaagaaagaagccgatgacaagaaagacgtgatctcaaacggagtggac
gaaagccccaccaaagacgactccagccagaaggtggtgatcaccaagactgtggagacc
atcactaccggagaggacggagccaagcatgtcaccaagtctgtaaccgtcaccgagaca
gtgaaggaggtggatgaggtggtgcaggagaagctggtggccaccaaaaaggtggagaag
gtgtccacgcagtcggtgaagcaggtgacggaaaccgagtaa
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