Astyanax mexicanus (Mexican tetra): 103046988
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Entry
103046988 CDS
T05042
Name
(RefSeq) protein transport protein Sec16A-like isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103046988
Membrane trafficking [BR:
amex04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
103046988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
103046988
NCBI-ProteinID:
XP_049326471
Ensembl:
ENSAMXG00000015910
LinkDB
All DBs
Position
22:23771754..23798352
Genome browser
AA seq
1846 aa
AA seq
DB search
MASPPTPSRSSSLESETDHSLSISPGVAGMSDTDNYVQPETYFQPIQEHATLNSEYAAII
SGSPSTIDLPDPIPTQVSPDGTELIVSNDASPQFLSLQTSSPDPSCLPLTHDITTSCDLT
TENQWSEPIGLGTLVSTPSPPCSLLSPTISVPKTSSPQIVPLTQDVDPFSCSPETQVQLN
QGAELASSPCLDHMSKDSEVTSSLPYQESAKSELAGGSSEVSEHASSLDCYTSDMNILGM
DTKQDNMNMNSISDEKLIPDSDVLETSIISNSSTFIDENNDSINPEVSVENSVINIGGRQ
PIEHWIHSSDLSSLEKPSISEKLLPITDVVENIQSESPDLKTLMLPTVPKAKTQCSADSM
PVLYLQVTKAVQEEAQRETDTNLSQPPTVSSTSTRNKVRFSPSELTEHTARTVLGTIPND
GLLNCHRDPGSHEDPSKQLRNPPVVGDRITTDQKENSKKASPFPTKSRQPISPDIQQTQP
THWTSQAMSEANYHGYYRSVFPDYGYTDPPHTDKYSLHYFRAQHAKMDLKSCKPQMEFDA
QCFEKNNQNGQPNLEQLEPFSAEHVNNSNQKTLWSRERSVKADQAKTTPYSSENYTNYYK
YGGWNPQGHYSNAYYQGYYYPYNYGYQSEFSKSNSQQYNTNPDHYDDWWRYDPRYDATFD
RDYYSQYQQSYWDQGDRQSSHSGYSTRSMSSMNSHHSRFSWHSEQSWGYPNHMGGYPPYE
VTVQSPALSKDHRQLQKQTSTEDFNASCSSESPSVPEQFSCPHCCARFGPAGQLVQVLPN
LPSEGKPALVQIHSTEVMLQDSRDQIQLQTFPGPLIKDRTHKSEVLEFIRKKHQECLQSD
TLADKETSCLIWEMMELVCKQNGKLVGTDISHLLLRNQRQPSSPKKASSDLIDFINEALS
GTLGDTSTDAESVTEEDPFWTTSKDTEKAVQHFRELLILGQKKDALQTAVSKGLWGHAFM
LASKMDNRAYSQVMSQFIDNLPESDPLRSFYQLMSGKIPSSAAHCGDKEWGDWRTHLAMV
LSNHTRFKHLHKKTISRMGDALASAGRSDAASFCYMVVQLDVDTQSNKSGLFVLGANSSL
PPPKYVTNEAIQRTEVFEYALSLGSDSAYLPEFQIFKFIYACRLAEAGLCAQAFQYCEVI
SKALLTSGLDQSLTLISQLIELSAKIRHFDQQMKDTTELDSSLEPEWMVNLRDLQCQIIE
KLNSPSIEKQQDTNLVPTLTTDSQAPQDIIENRAKAILPRSSQVLDAGSLESDNKAVSLS
SISPIPQKSSYPTKLLVQDPVPAVETQGHSEPHHHNLLSTAGMLPENVGYLSVDQSREAK
ESTSTLATPLLAPPTVQQLFPVITESTIAQSQHTDLQSQYTDLQSQPANTIPSPKSTEFA
MESSALPYMSSPSFVSMASESESVPRFVVDSNESYPLPSTMLPFPTSKSVPQLLASNKDA
HELPSTTLSSTIILAKELEPVAQLTDSPMEPHVLPSTTLLSNLSLTKSESVPQLTVPLPF
PTNIDQIKGQPDQKQQPVSQSNAFMSSPQMSSANNPLATEQSLYSDKVQPVPSVPTTMQV
PQPSYPSVSTGMSPPTYLMGPQTVPLLTVPLPTSHNLPPHVAQTEFRPPQTMSLPEDPMP
QCPNGQKPPSLPHSANPYAMGDKMLSSKQMHMLSKPLIPRLFVPQSPPPDPQPKKQETGG
GWFSWLFGKKKEVDLPVDTGKSLVWEDSLQRWVDPYEKKEKIQFGAGSKDFDVPHTKGLL
DAKPVLSPGPKRGYMAPLNPVLMGNSPGTQHYASSDRSSTETQIVKPPNTLLTDPGKGTG
HLRWTPNSQPVSYSQTTQNLSQNQKLLETAGNVPLYNPSHFCQDIL
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaccaccaacaccaagcagaagctcttccttggagtctgagactgaccattca
ctcagtatcagtccaggagttgctggaatgtcagatacagacaattatgtccaaccagaa
acctacttccagccaattcaggagcatgccactctgaatagtgaatatgctgcaataata
agtggttccccttccactattgaccttccagatccaataccaacccaagtatcacctgat
ggaacagagctgattgtctccaatgatgcttctccacagtttctgtctctacagacaagc
tcaccagatccctcctgcctcccattaacacatgacatcactacttcgtgtgatcttacc
acagaaaaccaatggtctgaacccattggtcttggtactcttgtttcaactccatctcca
ccttgctcattactttcaccaactatttccgtccctaaaacatcatctccccaaattgtc
ccactaacacaagatgtggacccattttcatgtagtcctgaaactcaagttcagctaaac
cagggtgcagagcttgcatcatctccatgtttagaccacatgtctaaggattctgaggta
acttctagtctcccctatcaagaaagtgctaaatcagaactggctggtggatcttcagaa
gtttcagaacatgcaagcagcttggattgttatacaagtgatatgaatatacttggaatg
gatactaaacaggacaacatgaatatgaatagtatctcagatgagaaacttattccagac
agtgatgttcttgaaaccagtatcatttctaattcatctacatttattgatgaaaacaat
gatagcatcaacccagaggtttctgtagagaacagtgtcatcaatataggtggcaggcaa
cctatcgaacattggatacattcatctgatttgtcatcccttgaaaagccatcaatctct
gagaagcttctaccaatcactgatgtggtcgagaacatccagtctgaatcgcctgaccta
aagacccttatgcttccaactgtacccaaagctaaaacacaatgctcagctgactccatg
cctgttttataccttcaagtgacaaaagctgtgcaggaagaggctcagagagaaacagac
actaacctgtcccaaccaccaacagtctcctcaacgtcaacccgaaataaagttagattc
agtccttcagaacttacagaacatacagctcgtacagtgttgggcaccattccaaatgat
ggccttctaaattgccacagagatcctggaagccatgaagatccaagcaaacaattaagg
aacccacctgtggttggagatagaataacaacagaccaaaaggagaactcaaaaaaagct
tcaccttttccaacaaagagtcgtcagcctatatctcctgatattcagcaaacacagcca
acacactggacatctcaggcaatgtctgaagcaaactaccacggctactacagatctgtc
tttccagattatggttacactgatcctccacacacagacaagtattctttacattatttc
agggcacaacatgcgaagatggatctaaaaagttgcaagccacaaatggaatttgatgcc
cagtgttttgaaaagaacaatcaaaacggacagcccaatctggaacaacttgagccgttc
agtgcagaacatgtcaacaactcaaatcagaaaaccttatggtccagagagaggtctgtc
aaggctgaccaagctaaaacaactccatactcgtcagaaaactacacaaattactataaa
tatggaggatggaatcctcaaggacactattccaatgcgtactaccaaggctactattat
ccttataactatggataccaatcagagttctccaaaagcaacagtcaacaatacaacaca
aatcctgaccactatgatgactggtggagatatgaccctcgctatgacgcaacctttgac
cgtgattattactcccagtaccagcagtcttactgggatcagggtgatcggcaaagcagc
cacagtggttactctaccaggagcatgtctagcatgaacagccatcatagccgtttcagc
tggcactcagaacagagctggggatacccaaaccatatgggcggctatccaccatatgaa
gttactgttcagtctccagctctttctaaagaccatcgtcaattacagaagcaaaccagc
actgaggacttcaatgcttcatgctcttcagaaagtccttctgtcccggagcagttctcc
tgccctcactgctgtgctcggtttggacctgctggacagctggttcaggtgctcccaaac
cttccatctgagggcaagccagcactggttcagatccacagcactgaggtgatgctgcag
gactcccgggatcaaatccaactccaaaccttcccaggacctctcataaaagataggacc
cacaagtcagaggtgctggaattcatcagaaagaagcatcaggaatgtctacagagtgac
actctggcagataaagaaacatcctgccttatatgggagatgatggagttagtttgcaaa
caaaatggtaaactggtgggaactgatatatctcacctcttgctacgaaatcagagacaa
ccatcctcacccaagaaagcttcttctgatctcattgattttataaatgaagccctcagt
ggaacactgggagatacatccacagatgcagagtcagtcactgaagaagatccattttgg
acaacatctaaagatactgaaaaagctgtacagcacttcagggagttattaatactgggc
cagaaaaaggatgctcttcagacagcagtaagcaaaggcttgtggggacacgctttcatg
cttgccagtaaaatggacaacagggcttattctcaagtaatgagccagtttattgataat
ttgccagagagtgatccactgcggagcttttatcagctcatgtctggaaagataccttca
tctgcagctcactgtggagataaggagtggggggactggcgcacacacctggccatggtt
ttatcaaaccacacacgcttcaaacacctgcacaagaaaaccatatccagaatgggagat
gcgttagcttctgcaggacgatctgatgctgctagcttctgttacatggtggttcaacta
gatgtggacacgcagagtaacaagtcaggcctatttgttcttggggccaattccagttta
cctcctccgaagtatgtcaccaatgaagcaatccagcgtactgaagtgtttgaatatgct
ctgtctcttggttcagattcagcatatctaccagaattccagatcttcaagtttatctat
gcttgccggttagctgaagctgggctctgtgctcaggcatttcagtactgtgaagtgatc
tccaaagcactgctaacctctggtttagaccagtctctgacattaataagccagctaatt
gagctatctgcaaaaataaggcacttcgaccaacaaatgaaagacaccacagaacttgac
tcatcactagaaccagaatggatggtcaaccttcgggatcttcaatgccagattattgag
aaactgaactcacccagcattgaaaagcagcaggacacaaaccttgttcctacattgaca
acagactcccaagcaccacaagacattattgagaatagagcaaaagccatacttcccaga
tcaagccaagttcttgatgcaggttctcttgaatctgacaacaaggctgtttcactgtct
tcaatttctccaattccccaaaagtcctcttaccctacaaagctactggtacaagatcca
gttccagcggtagagacacaaggacattctgagcctcaccatcataatttgctgtccact
gctgggatgctacctgaaaatgtaggctatttatcagtagatcagtccagggaagccaaa
gagtcaacatccactctggctacaccattgcttgcaccaccaacagtgcagcaactgttt
cctgtcattactgagtctaccatagcgcagtcccaacacacagaccttcagtctcaatac
acagaccttcaatcacagcctgccaacactattcctagtccaaagtctacagagtttgca
atggagtcaagtgcattgccttatatgtcatcaccttcttttgtgtcaatggcatcagaa
tcagagtcagttccacgttttgttgttgactccaacgagtcctatccattaccttctacc
atgttaccttttcccacatcaaaatcagtgcctcagttacttgcttcaaacaaagatgct
cacgaattaccttctacaacattatcttctaccataatattggcaaaagaattagagcct
gtggctcagttaactgattcgcccatggaacctcatgtattgccttctacaacattacta
tctaacttgtctttgacaaaatcagagtcagtgcctcagttaacagtccctttgcctttt
cccacaaacattgaccagatcaagggtcaacccgatcaaaagcagcagccagtctctcaa
tcaaatgcatttatgtcttctcctcaaatgtcttctgccaataatcctttggccacagag
cagagcctgtattctgacaaggtacaaccagtgccttccgtcccaacaaccatgcaggtt
cctcaaccatcatacccgtctgtatctactggaatgtctccaccaacgtatctcatgggg
ccacaaacagtgccccttcttactgtgcctttacccacatcccataatttacctccacat
gtagcacagacggagttcaggcctccccagactatgagcctgccagaagacccaatgcct
cagtgtcccaatggacagaaacctccttcactcccccacagtgccaatccctatgccatg
ggagataaaatgctttcctcaaagcagatgcacatgttatccaaacccttgattccaagg
ctgtttgtaccccagagtccacctccagatccccagcccaaaaagcaggaaactggaggg
gggtggttcagctggctttttggcaaaaagaaggaagttgatttacctgtagatacggga
aaatcacttgtttgggaggacagccttcaaagatgggtggatccatatgagaaaaaggaa
aagattcagtttggtgcaggttctaaagattttgatgttccacacacaaaggggctgttg
gatgcaaagcctgttttaagtccagggcctaagagaggatatatggcaccacttaaccca
gtcttaatgggcaacagcccaggtactcaacattatgcctcatcggacagaagcagcact
gagacacaaatagtcaagccacccaacacacttctaacagatccaggtaaaggaacggga
cacctgaggtggactccgaactcccagcctgtttcatattctcaaacaactcagaatttg
agtcagaatcaaaaattgctggaaactgctggaaatgttccattgtataacccgtcccac
ttctgtcaggatattctatga
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integrated database retrieval system
