Astyanax mexicanus (Mexican tetra): 103047089 Help Entry 103047089         CDS       T05042                                  Symbol msh2 Name (RefSeq) DNA mismatch repair protein Msh2   KO K08735   DNA mismatch repair protein MSH2 Organism amex  Astyanax mexicanus (Mexican tetra) Pathway amex03430   Mismatch repair Brite KEGG Orthology (KO) [BR:amex00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     103047089 (msh2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:amex03400]     103047089 (msh2) DNA repair and recombination proteins [BR:amex03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      103047089 (msh2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27 Motif Other DBs NCBI-GeneID:  103047089 NCBI-ProteinID:  XP_022526065 Ensembl:  ENSAMXG00000015880 LinkDB All DBs Position 15:complement(39397886..39413562) Genome browser AA seq 939 aa AA seqDB search MAVQPKQSVCMDSTSESGFISFFSSMPEKPDTTLRIFDRTDYYTVHGKDALFTAREVFKT QGVIKYLGSGSRRLEGVVLSKMNFESFVRDLLLVRQYRVEVYRNKAGGKSSKDHDWQIAY KASPGNLTQFEEILFGGGGLGEGAAGVVGIRLGTGGDGQRVVGVGYVDSTLRKMGVCEFP DNDQFSNLEALLVQIGPKECVLPGGDTAGDLGKLRQVIQRGGILLSDRKKMEFTAKDIVQ DLNRLLKARKGETVSSAALPEMEKQIAVSCLAAVIKYLELLSDEANFGSFKLTTFDLNQY MRLDNAAVQALNLFQGSSSDDPTGTHSLAGLLNKCRTPQGQRLVNQWLKQPLIDKNKIEE RLDLVESFVEDSELRQSCQEDLLRRFPDLNRLAKKLQRQSANLQDCYRVYQAVGQLPGLV QALERHTGKHQVLLNAAFISPFSDLTSDFSKFQEMIETTLDMNQIDHHEFLVKPSFDPTL SELRESMDQLEKSMQSALNSAARELGLDAGKTIKLESNAQMGYFFRVTCKEEKSLRNNKK FTTLDVQKNGVRFTNSKLSSLNEEYVKSREEYEEAQNAIVKEIIGIAGGYVEPLQTLNEV IAQLDAVVSFAVVSHAAPVPFVRPRILEKGSGRLILKGSRHPCVEAQDDVAFIPNDVTFT RGEQMFHIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQ IKGVSTFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATRLKSFC LFATHFHELTALAQQEPTVCNLHVTALTTDSTLTMLYRVKKGVCDQSFGIHVAELANFPK HVIANAREKALELEEFQDISRAEEEGVDAGPEAKKRCLEKQDGEKIIEAFLDKVKSLPVE DMTDEAIKAELRKLKAEVVAQNNSFVTEIVSRAANVKVV NT seq 2820 nt NT seq  +upstreamnt  +downstreamnt atggcggtgcagccgaagcagagcgtgtgtatggactccacttcagagagcggcttcatc agcttcttcagctccatgccggagaaacccgacaccacgctgcggatcttcgaccgcacc gactactacaccgtgcacggcaaggatgcgctgttcaccgcgcgggaggtgttcaaaacc cagggggtcatcaaatacctgggctcagggagcaggaggctggagggtgtggtcctcagt aagatgaactttgagtcgtttgtgagggatcttctgctggtcaggcagtaccgagtggag gtgtacaggaataaggcaggtggcaagagcagcaaggaccatgactggcagatcgcctac aaggcttctccaggaaacctgacccagtttgaggagatcctgtttggtggtggaggtctg ggtgaaggtgctgctggagtggtggggatccgattgggtacgggaggtgatgggcagcgg gttgtgggcgtcggttacgtggattctacactcaggaaaatgggtgtgtgtgagtttcca gataacgaccagttctccaatctggaagctctgctggtgcagattggccccaaggagtgt gtgctgcctgggggcgatacagctggagacctggggaaacttagacaggtgatacagcgt ggaggaatcctgctatcagacaggaagaagatggagtttacagctaaagacatagttcag gatctgaatcgcttactgaaagctcgcaaaggagagacggtgtcgagtgcagcgcttcca gagatggagaaacagattgctgtgtcctgcttggccgccgtcatcaaatatctggagctt ctgtctgatgaggccaacttcggttcttttaagttaactacattcgaccttaaccagtac atgcgtctggacaacgctgcggtgcaggctctcaacctgtttcagggttcctcatctgat gatcctactggtacccattccctggcagggctgttgaataagtgccgaactcctcagggc cagagactggtcaaccagtggctcaaacagcctctaatagacaaaaacaagattgaagag aggcttgatctggtggagagttttgtagaggactcagagctgaggcagagctgtcaggag gatctgctgcgacgctttcctgacctgaaccgtctggctaagaagctccagcggcagagt gccaatctgcaggactgttaccgggtctaccaggccgtgggccagctgccgggtcttgtg caggctcttgagagacacactggaaagcatcaggtcctgttgaacgcagccttcatttcg cccttcagcgacctcacctccgacttctccaagtttcaggagatgattgaaaccacgctg gacatgaaccagattgatcaccatgaattcctggtgaaaccctcgtttgaccccacactg agtgaactgagggagagcatggaccagctggagaaaagcatgcagtctgctctcaacagt gcagctcgtgagcttggtctggatgcaggcaaaacaataaagctggaatccaatgcacag atgggttatttcttccgggtcacttgtaaagaggagaagtctctgcgcaacaataagaag ttcacaacactggatgtgcagaagaacggagtgcggtttactaacagtaagctgagctct ttgaatgaggagtacgttaaaagcagggaggagtatgaggaggctcagaatgccatcgtt aaagagataatcggcattgctggaggctacgtggagccgctgcagaccctgaacgaggtg attgcccagctggatgcggtggtcagctttgctgtggtgtcccacgctgcccctgttccc tttgtgagacccaggatcctggagaaaggcagcggcaggctgatcctgaagggatctcga catccttgtgtagaggctcaggatgatgtggccttcatccccaatgatgtaaccttcact agaggagagcagatgttccacattattacaggtccaaatatgggtggtaaatctacgtac atccgtcaggtgggcgtgatcgtgctcatggctcagattggctgcttcgtaccgtgtgac gaggccgagctgagcgtggtggactgtgtgctggcccgggtgggtgcgggggacagccag atcaaaggggtctccacctttatggcagaaatgctggagactgctgcgatcttacgttct gctactgaggattctctgatcataattgatgagctgggccgtggcacgtctacatacgat ggctttggtttggcttgggctatctcagagtacattgccacacgtctcaaatccttctgc ttgtttgccacacacttccatgagcttactgctctggctcagcaagaacctaccgtctgc aacctccacgtcaccgcgctgactactgacagcaccctcaccatgctctacagggtgaaa aagggtgtgtgcgaccagagctttgggatccacgtagccgagctggctaactttcccaaa catgtgatcgctaatgcacgagaaaaagctctggagcttgaggagttccaggatatctcc agagctgaggaggaaggagtggatgcagggcctgaagccaagaagcgctgcctggagaaa caggatggggagaagatcatcgaggctttcctggataaggtgaagtcgctgcctgttgag gacatgacggatgaagccatcaaagcagagctgcgtaaactgaaggctgaagttgtggct cagaacaacagctttgttaccgagatcgtctcccgagctgcgaacgtgaaagtggtttaa

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