Astyanax mexicanus (Mexican tetra): 103047141 Help Entry 103047141         CDS       T05042                                  Symbol dmxl1 Name (RefSeq) dmX-like protein 1 isoform X1   KO K24155   rabconnectin-3a Organism amex  Astyanax mexicanus (Mexican tetra) Pathway amex04142   Lysosome Brite KEGG Orthology (KO) [BR:amex00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     103047141 (dmxl1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:amex04131]     103047141 (dmxl1) Membrane trafficking [BR:amex04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     103047141 (dmxl1)  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     103047141 (dmxl1)    RAVE complex     103047141 (dmxl1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_HPS5 NBCH_WD40 PEP5_VPS11_N Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_Vps41 Beta-prop_SPT8 DUF688 Beta-prop_NWD2_C Motif Other DBs NCBI-GeneID:  103047141 NCBI-ProteinID:  XP_022526823 Ensembl:  ENSAMXG00000012769 LinkDB All DBs Position 12:complement(36885805..36944550) Genome browser AA seq 3012 aa AA seqDB search MNLHQVLTGAVNPGDNCFSVGSINNVPFTAYASGCDIVILGSDFERLQIIPGAKHGNIQV GCVDCSQQGGQIAASYGNIVCIFEPVQISPKEKRQQKLNYHWQKTGQFILQSIAHNLAWR PTGGSLLTGSNCLQLWSNVNFSCGANGETSTIPPCSWRCIWQSKSASPIHLMKFSPGGEF FATAGQDDCLVKVWYNTSKWQTDAMKLFTPPELSSQGEIDFSFIYLTHPRAVTGFSWRKT SKYMPRGAVCNVLLTCCKDSVCRLWAETLLPSDCLLSGLRHNHSSSSSSSSGNSSDALKS NNTKQAYSNNKGQSGASLELNLNESWRGPVRCTAQPAHTGLLPHQQNKHYTHRASIPHAN ALCHFHIAASINPATDIPLLPSISSLSGSDEEEPGGPFTVHWLNNKELHLTLTMEVFLQQ LRSSMEQQNHSQANQADDEFDEEGNAVNPEGRKGEMNMDAGSIPLPAAAVEHQVDVLLGD WNRGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQAQVSFVSRIPVAFPTGDANSLSRS VVMYACNKNVDLAIQHGRQRPPGLPRSSSVLIGLGQSKPSSNSLRLSIFTPNVLMISKHA DGSLNQWAVSFAEGSAFSTVLSVSHKSRYCGHRFHLNELACHSLLPLLLTTSHHNALRTP QAENILTQSLPSPVSSGRKSRSSLGAVTQDPNAIYSELILWRVDPVGPLSFSGGVSELAR INSLHASAFSNVAWLPTLIPSNCLGVYGNSPSACFVASDGHSLRLYQAVIEAKKLLSELS NPEISKCVGEVFNIISQQSTARPGCIIELDAITDFQGKEIQLLHVFEEDLILGNEKKEGC SQESLPDETASSPPVFTARFFLVVIEFTQTRRSLLHMWHLQLAAVPVAIEETSTPVDKDT VASPLNSFNFETFSSPSSQRSKLSRTNLQSACRLTLTNERVYSEELSLPEGVEVLRVTPA AGHLSSSSLQPAGRAPYLLATSCSDGTVRFLSCSTASDSETADDTASIYIWEEWPLLVEE GLANSSAVSIPGWPVDVSCCHTSRVAVAYKDLKPQGLGMEPPIHVSVFQCESTGGSQWML EQTLKLDGLSSLPKNGSDDKHLIVPSLQDDLVDAGECLGSSCKTLVHLDWVSREDGSHIL TVGLGSKLYMYGTLLGKPPELGLSDSSRERCSSRLVLLRVVDLVSSVEGSLPIPVSLSWV RDGILVVGMDCEMHVYSQWQPPTPPKSALATCDTVVGSVSSLIAAVKQEGLNLQPPKKSL TRSMTSLAQKLSGKRTMYDLPVEMEDYGLFEAAHHLFPTLPQYHPVQLFELMDLGKVRRA KAILSHLVKCIAGEIVALKDTAINQERRLRSLTISASGSTARDPRMFNKAENPDYTEIDS IPPLPLYALLAADEDTTPKAKEKASSVSGDSGHGSSRTDTYDELFQANAVSLDDVDPLDG DDEDSNAKVIDLSQYSPTFFGPEHAQVLSSHLLHSSLPGLTRMEQMSLMALADTIASTST DIGESQGKSQGGETLDECGLKFLLAVRLHTFLLTSLPPAHRGQLLCQGLSTCHYAWAFHS EAEEELLNMLPAMQKGDPTWPELRAMGVGWWLRSTNKLRRCIEKVAKASFQRNNDPLDAA LFYLAMKKKAVVWGLYRSHKNVKMTAFFSNNFNEDRWRKAALKNAFSLLGKQRFQHSAAF FLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFETSSTYKKILQRHVLGQDHQIPMHQ DPFLRSMAHWVLDDYSRALDTLLEQPKPNVNASNQEKSAMSPCNPEVFNFYTYLRTHPLL LRRHFGSSEKAKVGLTAEGRMADSISLIERRLFFTAANAHLQAGCPMLALEVLSKMPKVV KKSKLLLNQEKPSLSSTGSGNPAGEKGKDQASALDWSQPTINGFESISDTLSSPREDHSQ SDSLLSFDWSQPSVTLQDEPLELKWDSDKEDSEDEEAGLAMKNIKPEDTTVIHESADSAS VSTDVTDSSLLLSEDILVARLKFSSCLKVLTAELRTLSTGYELDGGKLRHQLCHWLEREV VALQSCCGYNPYLQQLAEGISADLSQVRVGDEQETQGAAEEARVVQRRRRLWLQRNQPLL RIFLSYCSLHGSHGGGLASVRMELILLLQESQQDESSQIPIQQQASVPLLLACTASSKTV VANPIVHLTNLTHDVLHTINSLDSPPNPDVINNEIYVMHTLAASLSACIYQCLCDGHNYS HINQFTGTVYQSILLSHQHPVRTLSMDEAVLPNTSPAQWPGISALVRLLSAAGEENQPSL GVLLCEILTAVYLSLFVHGLATHSSNELFRIVAHPLNSKLWVAVFGGGARIPAVEKSSPP PAVAEDQERKQRRFRLRSSRSSSREVPDGPASPGPSPIVEQEASIFKERFVPPELSIWDY FIAKPFLPPSTSRVEYDSEESQGSEDEEEEDEDKFADAFDTNSPLQEHSNSNSYSWCLMR LAMVQLVLVNLKSFYPMAGHDLMDLPVCSPLCHSVLKTLQRWEQVLLKRLEIFGGPPSKY ISTQPMDETIASGPALLRHKALFEPSNTPFRSRHHSALPVKRLWQYLVKQEEVQETFIRN IFTKKRDQNESVEDYTDSMKYSGKEEPSLNQIEADLGYPGGKARIVHKESDIITAFAINK ANRNCLVIASTHDIQELDVSSILATQILTWIDDEPETEVKGGDEFLVVQARDDFSTLHGT TPYTHSSPGTPINMPWLGSLQTGRGAAMLIKRNINNVRRMTSHPTLPYYLTGAQDGSVRM FEWGHSQQIICFRSPGNSRVTRIRFNYQGNKFGIVDADGALSLWQTNTSGNTQKPYLTLQ CHNKTAHDFVFVGSSSLIATAGISTDNRNVCLWDTLVPPTSSLVHGFSCHESGATVLALA SKQQLLISGGRKGWISVLDLTQKLQRQSFQAHDSPVKALAVDSTEGCFISGSSEGNIKVW SMSTQSLLHTFPNEHARQSLFRNLGTGVMQIETAPGNHIFSCGADGTMKMRVLPDCLSAY SNNVKNDVKFIM NT seq 9039 nt NT seq  +upstreamnt  +downstreamnt atgaatctacaccaagtgctcactggggccgtcaaccccggggacaactgtttctctgtg gggagcataaacaacgtaccgttcacggcctatgcctctggctgcgacattgtgatcttg gggagtgactttgagcggctccagatcatcccaggtgccaaacatggtaacatccaagtg gggtgtgtggactgctctcagcaaggcggacaaattgctgcatcctatggaaacattgtt tgcatatttgagcctgtacagatcagtccgaaggaaaaaagacaacagaagctgaactac cactggcagaaaactggccagttcattttgcagtctatagcgcacaaccttgcctggaga cccacaggtggcagtctcctgactgggtcaaattgcttacagttatggtccaatgtaaat ttctcttgtggtgctaacggggagaccagtaccatccctccgtgttcttggaggtgtata tggcagagcaagtctgcttcacccattcacttaatgaagttttctccaggtggagaattt tttgccactgcggggcaggatgactgtttggtaaaagtgtggtacaacacaagcaagtgg cagacagacgctatgaagcttttcacgccccctgagctcagctctcaaggggagattgac ttctccttcatctacttgacccaccctcgtgccgtcactggattttcatggaggaaaacc agcaagtacatgcccagaggtgctgtctgtaacgtgttactgacctgctgcaaggacagc gtgtgccggctatgggcagagacgctgctgcctagcgactgtctgctgtctggactaaga cacaatcacagcagcagcagtagcagcagcagcggaaacagcagtgatgcactgaagtca aacaacacaaagcaagcctatagtaataacaaaggtcaaagtggggcgtctctggagcta aacctgaacgaatcgtggcgaggaccggtcaggtgcacagcccagccggcacacacaggg ctgctacctcatcagcagaacaaacattacacccacagggccagcattcctcatgccaat gctctgtgccacttccacatcgctgcaagcatcaacccggccacagatatcccgctgctg ccctccatctcgtcactgagtggttcagacgaggaggagcccggtggaccttttactgtt cactggctcaacaacaaagagctccatctcactctcaccatggaggttttccttcagcag cttagaagcagcatggagcagcagaaccattcacaggccaaccaggctgatgatgagttt gatgaagagggcaatgctgtgaaccctgaaggcagaaaaggagaaatgaacatggatgca ggctccattcctcttcccgcagctgcagtggagcaccaggtggatgtgttactgggtgac tggaacaggggagcggacatgctcttcagcatccaccctatggacggctctctgctggtg tggcatgtggactggctggatgaataccagccaggaatgtttcgtcaggcacaggtgtct tttgtttcccgaatacccgttgccttccccactggtgacgccaactcactcagccgcagt gtggtgatgtacgcctgcaacaaaaacgtggacctggccatccagcatggacgacagcgc cccccaggcctaccccggtcatcttccgttctgattggcttaggccaaagcaagcccagc tccaacagtctgcgcttaagcatcttcacgcctaatgttctgatgatctccaagcatgct gacggctccctcaaccagtgggcggtcagctttgctgagggctcggccttctccaccgtg ctcagcgtctcgcacaagtcccgctactgtggccaccgcttccaccttaacgaattggcc tgccactccctgttgcccctgctgctcaccacatctcaccacaatgccctgcgcactccc caggcagagaacatactaacccagtccctgcctagccctgtctcctcaggacggaaaagc cgctcatctctgggtgctgtgactcaagatccgaacgccatttacagtgagctgattctg tggcgtgtggaccccgttggtccactctcgttttcagggggcgtctccgagctggccagg atcaactcgctccatgcatcagctttctccaatgtggcctggctgcccaccctcatccct agcaactgtctgggggtgtatggcaactcgccaagtgcctgctttgtagcaagcgatggc cactccctgcgattgtatcaggcagtaattgaagccaagaagctgctgagtgaactttca aatcctgaaatttcgaaatgtgtcggggaagtgttcaacatcataagtcagcaatctacg gcgagaccaggctgcatcattgagttggatgccattacagactttcaggggaaggagatc cagctgctgcatgtgttcgaggaggacctgatcttgggaaacgagaaaaaagagggttgc tcacaagagtccctgcctgacgagactgcctccagcccaccagtttttactgcacgcttc tttctggtggtgatcgagtttacccagaccagaagatcactcttgcatatgtggcatctg caactggcagcggttcctgttgctattgaagagacttcaacccctgtagataaggacact gtggcttcaccgctcaacagcttcaactttgagactttcagctccccatcatcccagaga tctaagctgagcagaaccaacctacaaagcgcatgtcgactgactctgacgaatgagagg gtttacagtgaagagctgagccttccagaaggagttgaagtcctgcgtgtaactcctgca gcaggccacttgagttcatcatccttgcagccagctggacgggcgccgtatcttcttgcc acatcctgctcagatgggactgtgaggttcttgagttgcagcacagcctccgatagtgaa actgctgatgatactgcgtctatctacatctgggaagagtggcctttgctggtggaagaa ggcctggccaatagcagcgcggtgagcattcctggctggccggtggatgtcagctgctgc cacactagccgagtggccgttgcctacaaggacttgaaacctcagggacttggtatggag cctcctattcatgtgagtgtgttccagtgtgagtctactggagggtcccagtggatgctg gagcagacacttaaactagatgggttgagtagtctacctaaaaacggctctgatgataaa cacttgattgtgccgagtcttcaggatgatttggtggatgctggggagtgtttgggtagc agttgtaaaactctggttcatctggactgggtttctagagaggatggttctcacatattg acagtaggtcttggatctaaactgtacatgtatggaacactcttgggaaaacctccagaa ttgggcctgtcagacagcagcagggaacgctgctcttctcggcttgttctcttgcgggtt gtggacctggtgtcttcagtagagggctccttgcccatcccggtctctctttcctgggtt agagacggtatcttggtagtgggcatggactgtgagatgcacgtttactcgcagtggcaa ccgcccaccccacccaaatcggcactcgccacgtgcgatacagtggttggaagtgtgagt tcacttattgcagcagtgaagcaagaaggtttaaatcttcagcctccaaagaaatctctt accaggtctatgaccagtctggcacagaagctaagcggcaaaaggacaatgtatgacctt ccagttgagatggaggactatggcttattcgaggcagcccaccacctgttccccaccctt cctcaatatcacccggttcaactctttgaactgatggacctcggaaaggtgcgacgggcc aaggcaatcctctcccatctggtcaagtgcatagctggagagatcgtggctctgaaagac actgccatcaatcaggagcggcgtttacgatccctcaccatcagcgcgagtggcagcact gccagagatccgagaatgtttaacaaggccgagaacccagactacacagagatcgactcc atcccaccactacctctttatgctctgctggctgctgatgaagacacgacgcccaaagcc aaagagaaagcaagtagcgtgagtggggacagcggccatggctccagtcggacagacacc tacgacgagcttttccaggccaatgccgtaagcctggatgatgtggatcctttagacggt gatgatgaggattctaacgccaaagtcatcgatctttctcaatatagtccaactttcttc ggcccagagcacgcccaagttctgtccagccacctgcttcactccagcctgccaggcctg acacgcatggagcagatgtctctcatggccttggctgacaccatcgcatcaaccagcaca gatatcggggagagtcaagggaagagtcaaggtggagagacactggatgaatgcggtttg aagttcttgctggctgttcgtttgcataccttcctgctgacctcattgcctccagcacat cgtggacagcttctgtgtcaaggattgtccacttgtcactacgcctgggcgtttcactcc gaggctgaggaggagctgctcaacatgcttcctgccatgcagaaaggagatcccacctgg cctgagcttagagctatgggtgtgggctggtggctgaggagcaccaataagcttcgcaga tgcattgaaaaggtagcgaaagcgtcttttcagagaaacaatgatccactggatgcagcc ctgttctatttagctatgaagaagaaagctgtggtttggggattatacaggtcccataag aatgtgaagatgacagccttcttcagtaacaactttaatgaggaccgatggaggaaggct gccttgaagaatgccttctctctccttggaaagcagcggtttcagcactcggcagccttc tttctgctggcaggctccctcaaggatgctgtagaggtttgtttggagaaaatgcaggac ctgcagttggctttggttattagcagattatatgagtcagagtttgagacatcctccacc tataaaaagatcctccagaggcacgtgctgggtcaagaccaccaaatcccaatgcaccag gatccgtttctacgtagcatggcacactgggtcctggatgattacagtagagccttggat acattgcttgaacaacccaagccaaatgtcaatgcttcaaaccaagaaaaatcggccatg tccccttgcaatccagaggttttcaatttctacacctacctcaggactcacccgctgctg cttcgccgccattttggctcctcagaaaaagctaaggtgggactgacggcagagggccgc atggctgactctataagcctcatagagagaagactgttcttcactgccgctaatgctcac ttacaagcgggctgccccatgctcgctttagaagtcctctccaaaatgcccaaggttgtt aagaaatctaagctgctgctcaaccaagaaaagccctcactttcttctactggctctggc aacccagctggagagaaggggaaagaccaggcttctgctttggactggtcccaacctacg attaatggctttgagtccatttcggacaccctgtcctcccccagagaggaccacagccag tccgactctctgctgagctttgactggagccagccgtccgtgactttacaggacgaaccg ctggagctgaagtgggacagcgacaaagaagactcagaagatgaagaagctggactggcg atgaagaacatcaaaccggaagacaccactgtcattcatgagagcgctgactccgcctct gtttccacggatgtgacggacagctctctccttctctctgaagacatcttggtcgcccgg ctaaagttcagctcctgcctgaaggtcctcacagctgagctgcgaactctctccacaggt tacgagctggacgggggcaagctgcgccatcagctgtgccactggctggagcgggaggtg gtggccctccagagttgttgtggctacaacccctacctccagcagttggccgagggcatc tcggccgacctcagccaggtcagagttggagatgagcaagagacccaaggggcagctgag gaggccagggtagtgcagcgcagacgcagactctggctgcagaggaaccagcctctactg cgcatctttctcagctactgcagcctgcacggctctcacgggggagggctggcctccgtc aggatggagctcattctgctgctgcaggagtcccagcaggatgagagttcccagattccc atacagcagcaagcttcagttcctctgctgctggcctgcaccgccagctctaaaacagtg gtggccaatcccatagttcacctgaccaacctgacgcatgacgtactgcacaccatcaat tccctagactcgcctcccaacccagatgtcattaataatgagatctacgtgatgcacacg ctggcagcctccctgtccgcctgcatctatcagtgcctctgcgacggccacaattacagt catatcaaccagttcacaggaactgtgtaccagagcattcttctttcccatcagcaccca gtgcgaaccctcagcatggacgaggctgtccttcccaacacgtctccagcacagtggcct ggtatcagtgctttggtccgcctcctgagcgcagcaggggaggagaaccagcccagtctg ggggtgctgctttgtgagatcctcactgccgtctacctcagcctgttcgtgcatggcctg gccacccactccagcaacgagctcttccgcattgtggcccaccccctcaacagcaagctg tgggtggctgtgtttggtgggggggctcgaattcccgcagtggagaagtccagcccgcct ccagccgtggcagaggaccaagagcggaagcagaggcgctttaggcttcgttcttccaga agcagctccagggaggtgccagacggccctgccagccccggccccagccccatagtagag caggaagcgtccatctttaaagaacgctttgtgcccccagagctcagcatctgggactac ttcattgcaaagcccttcctgccaccatccaccagccgtgttgagtatgattcagaggaa agccagggaagtgaggacgaagaagaggaggatgaagacaagtttgcggatgcttttgac accaattctcccctgcaagaacattccaacagcaactcgtacagttggtgtctgatgcgt ttggccatggtgcagttggtattggtgaacttgaagtcgttctatccaatggctggccat gacctcatggatctgcctgtgtgttcaccactgtgccactcggtactgaagaccctgcag cgctgggagcaggtgttgctgaagagactggagatttttggaggtcctccatcgaagtac atctctacacaacctatggatgagaccatcgcgtccgggccagctctcctccgacacaag gccttatttgagccctctaacacgcctttcaggtcccgacatcattcggctcttcctgta aagagactgtggcaatacctggtcaagcaggaggaggtgcaggagacttttatccgcaac attttcaccaaaaagcgagatcagaacgagtcggttgaggactacactgacagtatgaaa tattcagggaaggaggagccgagcctcaatcagattgaggcagatctgggttaccctgga ggaaaagcgcgcatcgtccacaaggaatctgacatcatcacggcttttgccatcaacaag gctaatcgcaactgcttagtaatcgcttccacccacgacatccaggagctggatgtgtcc tccatcctcgccactcagatactgacgtggatcgatgacgagccagagacagaagtgaaa ggaggcgatgaattcttggtggtccaagcccgggatgacttcagcactttgcacgggaca acaccctacactcacagcagccctggaactcccattaacatgccctggttgggcagcctc cagacaggcagaggagctgccatgctaatcaagcggaacattaacaacgtgaggaggatg acgtcccaccctacccttccgtactacctaaccggagcgcaggacggcagcgtgaggatg ttcgagtggggccactcgcagcagatcatctgcttcaggagccccggcaactccagggtc acaaggattaggtttaactatcaaggaaataagtttggtattgttgatgcagatggagca ctcagtctctggcagacgaacacttcggggaacacacagaaaccatacctgactttgcag tgccataataaaacagctcacgactttgtgtttgtgggttcctcttccctcattgccact gctggcatctccactgacaacagaaatgtgtgtttgtgggatacactggtgcctccaacc agcagcttggttcacggcttcagctgccatgagtccggcgccactgtgctggctctagct tccaagcagcagctcctgatcagcggcgggaggaagggctggatcagtgtgctggatctc acccaaaagctccagcgccagagcttccaggcccacgactcgcccgtcaaagccctggct gtggactccaccgaaggctgctttatcagcggctcatccgaaggcaacataaaggtatgg agcatgtccacccagtccctgttgcacactttcccgaacgagcacgcccggcagtctctc ttccggaacctcggcacgggcgtcatgcagatcgagacggcgccgggcaatcacatcttc tcctgcggggctgacggaaccatgaagatgcgggttctcccagactgtttgagcgcgtac agcaacaatgtgaagaacgacgtcaagttcatcatgtag

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