KEGG   Astyanax mexicanus (Mexican tetra): 103047194
Entry
103047194         CDS       T05042                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103047194 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amex03041]
    103047194 (cdc5l)
   03400 DNA repair and recombination proteins [BR:amex03400]
    103047194 (cdc5l)
Spliceosome [BR:amex03041]
 Complex B
  Other components
   Prp19 complex
    103047194 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    103047194 (cdc5l)
DNA repair and recombination proteins [BR:amex03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    103047194 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect DUF4072 Rap1_C
Other DBs
NCBI-GeneID: 103047194
NCBI-ProteinID: XP_049319919
Ensembl: ENSAMXG00000000894
LinkDB
Position
14:16943424..16957293
AA seq 803 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEDTTDDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIDIQKKRKKKRGVDYNAEIPFEKKPAQGFYDTSMEQYDPLEPDFK
RLRQQHLDGELRNEKEERERKKDRQKIKKKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELEEVVKLGQASEIARQTAEESGITNSASSALLSEYNVTNNAMALRTPQTPAAQD
KIIQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSHGA
EGLTPHSGMTPKPSMGVTPGRTPLRDKLNINSEDGVVDYADPAYAKHLQRESREHLKMGL
LSLPMPKNDFEIVLPENAERELEEAEVDESFVEDASDIELRKQAVRDAEREKELRQRHTA
VQRNLPRPSEVNETILRPQNVEPPLTDLQQAEELIKKEMITMIHFDSLHHPYTEALAKKV
KGVGSSSNNAEHIAFLEKTPYEKVGEEDLKKAKDLLKQEMEVVKHGMGHGDLSNEAYNQV
WEECYSQVLYLPGQNRYTRANLASKKDRIESLEKKLEINRGHMTTEAKRAAKMEKKMKIL
LGGYQSRAMGLMKQLSDLWDQVEQAHMELHTFQELKKQEDTAIPRRQEALREDVQRQQER
EKELQQRFADLLLEKETLGSEKY
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgccgcgaattatgattaaaggaggcgtttggaggaacactgaggatgagatccttaaa
gcagctgtaatgaaatatggcaaaaatcaatggtcccggattgcctctttgctgcataga
aagtcagctaaacagtgtaaagctagatggtatgagtggctggatcccagtattaagaaa
acagaatggtctcgtgaagaagaggaaaagttgctgcatctggccaagctgatgcccacc
cagtggagaacaatagcccccatcattggcaggacagctgcacagtgcctggagcactat
gaatttcttctagacaaagctgcccaaagagacaatgaagaagacacaacagatgaccct
cgcaagcttaagcctggggagattgaccctaaccctgagactaagccggccaggccagac
cctgtggatatggatgaagatgaactggagatgctgtctgaggccagggctcgtttagca
aacacacagggcaaaaaggccaagcggaaagccagggagaagcagcttgaggaggccagg
cgattggcagccctgcagaagcgcagagagttgcgtgctgcgggcatcgatattcagaag
aagagaaagaaaaagagaggcgtagactacaatgccgaaattccttttgagaagaagcct
gctcagggattctatgatacgtctatggagcaatatgatccacttgagcctgacttcaaa
agacttcgccagcagcatcttgacggggagctcagaaatgaaaaagaggaaagggaacgt
aagaaggacaggcagaaaatcaagaagaagaaagagtcggacctcccctctgctattttg
cagaccagcggagtgtctgagttcaccaagaagaggagtaagctggtcttgcctgcacca
cagatctctgatgctgaattggaggaagtggtcaaactcggccaggcgagcgagatcgcc
cgacaaactgctgaagagtcaggaattacaaactcggcctccagtgcactgctttctgaa
tacaatgtcaccaataatgctatggccctccgtacaccacagactcctgcagcacaggac
aagattattcaggaagcccagaatctgatggcactcacaaacgtggacacccctctgaag
ggaggtctgaacacacctctacatgagagtgacttttctggggtcacacctcagaggcag
gtggtccagactccaaatactgtactctctacaccattcagaacaccaagtcatggtgcc
gagggtttgactcctcatagcggtatgactccaaagccttccatgggagtgaccccaggc
cgaacaccactgcgtgacaaacttaacatcaactctgaagatggtgtggtggactatgca
gatccagcatatgcaaaacacctgcaacgggaatctcgcgagcatctgaagatgggcctg
ctgtctctgccgatgcccaaaaacgactttgagattgtgctgcctgagaatgctgaaagg
gagcttgaggaagcagaggtggacgagagctttgtggaggatgcgtccgacattgagctt
cgtaaacaagcagtcagagatgctgagcgggagaaggagctgaggcagagacatacagca
gtgcagaggaacttacccaggccttctgaggtaaacgagaccattctgaggcctcagaat
gtggaacctcctctcacagaccttcagcaggcagaggagctcattaagaaggaaatgatc
actatgattcactttgacagcctgcatcacccttatacagaggcactggccaaaaaagtt
aagggagtgggatccagctccaacaacgctgagcacattgccttcctggagaaaacgccc
tacgaaaaggttggggaggaagaccttaaaaaggccaaggacctgcttaagcaagaaatg
gaggtggtgaagcatggaatgggccatggtgatctttccaacgaggcctataaccaggtg
tgggaggaatgctacagccaggtgctgtacctgcctggtcagaaccgctatacaagagcc
aacttggccagcaagaaggacaggatcgaatccctggagaagaaactggagattaacagg
gggcacatgacaacagaggccaaacgtgcagctaagatggaaaagaagatgaagatcctg
ctgggtggataccagtctcgcgccatggggttgatgaagcagctcagtgacctgtgggac
caggtggagcaggcccacatggagctccacacattccaggagctgaagaagcaggaggac
acagccatcccacgcagacaggaggctctgagagaggatgtgcagaggcagcaggaaaga
gagaaagagcttcagcagaggttcgctgacctcctccttgagaaagaaacgttgggttca
gaaaagtactga

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